| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1318 |
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| Symbol | |
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| ID | 4309027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1445262 |
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| End bp | 1447649 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638149127 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_773210 |
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| Protein GI | 115351371 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase
[COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG ACTCCGTTTC CCCGCGGCGG CGCCTCGGCC GCCGCTTCCT GATCGAATGG
ATCGCGATCG GCTGCCTCGG GATCGCGGTG ATCCTCGCGT GCGCGCTCGG CCGGCTGTCG
TCGAGCGTCG ACGGGCTGAT CTACGACCGG CTGCTGATGC TGCGCAGCCT GCCGCTGTCG
CCCGACGTCG TCGTCGTCGA CATCGACAAC CAGAGCGTGT CCGCGCTCGG TCGCTGGCCG
TGGCCGCGCA GCGTGCATGC GCGGCTGCTG GACACGCTCG CGCGTGCGCA GCCGGCCGCG
GTCGTCTACG ACGTGTTGTT TACCGAGCAG TCGCCCGAGG ATCGTCCGTT CGCGGACGCG
ATGGCCCGGG TGCCGACCTT CCTCGCCGTG CTGCTGAGCC CGGAGCAGGC GGACGGCACG
CGCACCGTCG ATCCGCCGGT GGCGGAGCTG GCGGCCCGCG CGACGGGGCT CGGCCACATC
AATCTCGAAG TCGATCCCGA CGGCATCGTG CGCAGCGTCG CGCTGTTCGA AAGCGACGGA
CGCGTGCGCT GGCCGCAACT GATGGTGCCC GTCTACCGCG CGCTCGAGGC CGGCCGCCTG
CATCCGGCCG GCGGCGCGCC CGGCGCGCAT GCGCACGACC TGTCGCGCGA CGTGACCGGC
GAGGGCCGCT ACCTGATCCC GTTCAGCCGC AACACGCCCG CGTATCCGAC GCTGTCGTTC
AACGACGTGC TCGAAGGGCG CGTGAAACCC GACGCGCTGC GCGGCAAGAT CGTCGTCGTC
GGCGTGACCG CGTCGGGCCT CTACGACCGC TTCGCGACAC CGGTGTCGGG CGAGTTCGGC
CCGCTCGCCG GCGTGTACAT CCACGCGAAC GTGCTCGACA TGCTGACGAC CGGCAGCGCG
ATCCTGCCCG TGTCGCGCGC GGGGCTGTTC GTCGCGTCGC TGCTGCCGCT CGCGGTGCTG
CTGGCCGGCT TCCTGATGCT GTCGCCGTGG CGCGGCCTGC TGCTGACGCT GAGCCTGGCC
GCGGCGGCCG TCGTCGCGAG CGTCGCGCTG TTGTTCGAGG CGCGCGTGTG GTTGTCGCCC
GCGCCCGCGA TCTTCGGGCT GATCGCCGTG TATCCGATCT GGAACTGGCG GCGCCTCGAA
ATGACGATGT CGTACCTGCG CCGCGAGCTG CAGCGGCTCG CCGACGAGCC GCACCTGCTG
CCCGAGGCGC CGCGCACGCG CAGCGTCGGC GGCGACGTGC TCGAACGGCA GATGGCGCTG
ATGGCGCAGG CCGCGCAGCG CGTGCAGGAC ATGAAGCGCT TCGTGTGGGA CAGCCTCGAC
AGCATGCCGG AGCCGATCTT CGTCACCGAC CTGGCCGGCA CCGTGCTGAT CGCGAACCAC
GCGGCGAAGC GCTACGGGTC GAGGCTCGCG CTGCCGTTGC CGGAAGGCCG GCCGCTGCGC
GCCGCGCTCG GCGAGCTGAC CTTCATGAAG ACGGTCGACG GCAACGTCGA ACACGACGTC
GCGATCCGCG AACACTGGCC GGCCGCGCTC GACCCGACGC TCGAGGCCGA GCACGACGCG
ATGGCGCGCG GCATCGAGGT GCGCGACCGC GACGGGCTCG ACCATCTGCT ACGCTACGCG
GCATGTACGA ACGCGCAGGG CCACGTGACG GGCTGGATCG CCGGCCTCGT CGACGTGACC
GAGCTGCATG CGGCCGAGCG GCAGCGCGAG GAGGCGCTGC ACCTGCTGTC GCACGACATG
CGCTCGCCGC AGTCGTCGAT CCTCGCGCTC GTCGAGATCG AGCGCGAACG CGTCGAGACC
GACGCGACGC GCCGGCTGCT CGCGCGGATC GAGCGGTATG CGCATCGTGC GCTGTCGCTC
GCCGACGAGT TCGTGCAACT GGCGCGCGCG GAGTCGCAGG CGTACCAGCT CGAGCTGACG
AGCCTCGTCG ACGTGCTGAT CGACGCGAGC GACGAAGTCT GGCCGCAGGC GCAGGCCAAG
CGCATCCGCA TCGATACCGA CGTCGGCACC GACATGGGCT GGACGCGCGC CGACCGCTCG
CTGATCACGC GCGCGTTCGT CAACGTGCTG AACAACGCGG TCAAATACAG TCCGTCCGAC
ACGGTGATCA CGTGTACGCT GACGATCGAG CACGCATCGA GGCGGATGTT CTGTACGATT
CGCGATCAGG GGTACGGCAT CGCGCCGGAA GATCAGCGGC ATCTGTTCGA GCGTTTCAAG
CGGTTCCATG CCGGCGAGCG GCCCGAAATC TCGGGTTCCG GGCTCGGCAT GGCATTCGTG
AAGACGGTCG TCACGCGCCA CGGCGGCAGC GTGACGGTCG ACAGCGAAGT GGGTGTCGGC
ACCGCGGTGA CGGTGTCGCT GCCCGCGATC GACGAGCCGT CCGCCTGA
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| Protein sequence | MKTDSVSPRR RLGRRFLIEW IAIGCLGIAV ILACALGRLS SSVDGLIYDR LLMLRSLPLS
PDVVVVDIDN QSVSALGRWP WPRSVHARLL DTLARAQPAA VVYDVLFTEQ SPEDRPFADA
MARVPTFLAV LLSPEQADGT RTVDPPVAEL AARATGLGHI NLEVDPDGIV RSVALFESDG
RVRWPQLMVP VYRALEAGRL HPAGGAPGAH AHDLSRDVTG EGRYLIPFSR NTPAYPTLSF
NDVLEGRVKP DALRGKIVVV GVTASGLYDR FATPVSGEFG PLAGVYIHAN VLDMLTTGSA
ILPVSRAGLF VASLLPLAVL LAGFLMLSPW RGLLLTLSLA AAAVVASVAL LFEARVWLSP
APAIFGLIAV YPIWNWRRLE MTMSYLRREL QRLADEPHLL PEAPRTRSVG GDVLERQMAL
MAQAAQRVQD MKRFVWDSLD SMPEPIFVTD LAGTVLIANH AAKRYGSRLA LPLPEGRPLR
AALGELTFMK TVDGNVEHDV AIREHWPAAL DPTLEAEHDA MARGIEVRDR DGLDHLLRYA
ACTNAQGHVT GWIAGLVDVT ELHAAERQRE EALHLLSHDM RSPQSSILAL VEIERERVET
DATRRLLARI ERYAHRALSL ADEFVQLARA ESQAYQLELT SLVDVLIDAS DEVWPQAQAK
RIRIDTDVGT DMGWTRADRS LITRAFVNVL NNAVKYSPSD TVITCTLTIE HASRRMFCTI
RDQGYGIAPE DQRHLFERFK RFHAGERPEI SGSGLGMAFV KTVVTRHGGS VTVDSEVGVG
TAVTVSLPAI DEPSA
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