Gene Bamb_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1172 
Symbol 
ID4311177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1282178 
End bp1282705 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID638148979 
Producthypothetical protein 
Protein accessionYP_773064 
Protein GI115351225 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCC TTTCGCTTTC CCCCGCCGAG CGCTCCGCGC TGCGCTCCCA GGCCCATGCG 
CTCAAGCCCG TCGTGCTGAT CGGCGCCGAA GGGCTCACCG ACGCAGTGCT GAAGGAAATC
AAGGTGCACC TCGCCGCGCA CCAACTGATC AAGATTCGCG TGTTCGGTGA CGAGCGCGAC
GAGCGCGTCG CCATTTACGA CGAGATCTGC GACCGCCTGA GCGCCGCGCC GATCCAGCAC
ATCGGCAAGC TGCTGGTGAT CTGGAAGCCC GAGGCCGCCG TGACGGCCCC GGCCCGCGGC
CGTCGCGCCG GCACGCTGCC GAGCGCGGCC GAAGCCAGCG ACGACAGGAA AGGCCGCGCA
CCGCGCACCG TCAAGGTCGT CAAGGTGTCG CCGAACGCGA GCCCGGTGCG TCGCCCGAAG
CCGACCAAGG TCGTCGTGCG CGGCAACGAG CGCGTGACGG CGGGCGGCAC GGTGAAGCGC
GCGAAAAAGC GTCAGGCCAG CACGAAGCGG CCGCACCAGG ACAAGTAA
 
Protein sequence
MPALSLSPAE RSALRSQAHA LKPVVLIGAE GLTDAVLKEI KVHLAAHQLI KIRVFGDERD 
ERVAIYDEIC DRLSAAPIQH IGKLLVIWKP EAAVTAPARG RRAGTLPSAA EASDDRKGRA
PRTVKVVKVS PNASPVRRPK PTKVVVRGNE RVTAGGTVKR AKKRQASTKR PHQDK