| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1098 |
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| Symbol | |
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| ID | 4309673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1203102 |
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| End bp | 1206806 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148906 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_772991 |
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| Protein GI | 115351152 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CATCGCAGCC GCAGGCGGCG CTCGAACTCG ACGTGTTCGC GTGCCCGCTC
GACGGCGTCA ACCAGATCGA GGCGTCGGCC GGTACCGGCA AGACGTGGAA CATCTGCGCG
CTGTACGTGC GGCTGCTGCT CGAGAAAGAT CTCGGCGCGG ACGAAATCCT CGTCGTGACC
TTCACGAAGG CCGCGACCGC CGAACTGCAC GAGCGGATCC GCGGGCGGCT CGCGCAGCTC
GCGCATGCAC TCGATACCGG TGACGACGGC GGCGATCCGT TCGTCGAGCG CCTGCTCGAG
ACGACGCTCG GTGACGCCGG CACGCTCGAC CCCGAGACCG CCGCGAAGCG GATCCGGCGC
GCGTTGCGTG CATTCGACCA GGCGGCGATC CACACGATCC ACGCGTTCTG CCAGCGTGCG
CTGCAGGAAG CGCCGTTCGC CGCCGCGATG CCGTTCGCGT TCGACATGCA GGCCGACGAT
GCAGCGCTGC GCTTCGAACT CGCGGCGGAC TTCTGGCGCA CCCGCGTCGA ACCGATAGCC
GCGCGCTGGC CCGGCTTCGC GACGTGGCTC GTCGATTCCG GCGCGGGCCC GGCCGCGCTC
GACGCCCAGC TTGCGCGCCG GTTGAAGAAG CCGCTCGCCG CGCTGCGCTG GGACGGCGTC
GTCGAACCGG ACGAATCGGC GGAGGCTGCT GCCGCCGAGT GCTTTGCGGA GGCGGCGCGG
ATGTGGGCCG ACGAGCGCGA TGCGATCGAC GCGTTGCTGC GCGCCGCGCA GCCCGCGCTC
AATCAGCGCT CGCACAAGCC CGATGCGCTC GCCGATGCGC TCGGCGCGTG GACCGCGCAT
TTCGCGCAGG GCGATGCCGC GGCCGCGCTG CCGAAGGCGG CGCTCAAGCT CACGCGCACC
GCGCTCGCGA AGGCGACGAA AAAGGGCGGC GTGACCCCCG AGCACGCGTT CTTCGACGTG
GCCGACGCGC TCGAAGCGGC GGTGGCCGCG GCCGAGGCCA CGCAGCGCGC CCGCTGGCTC
GCGCTGATCG CCGACTGGCT CGACACCGCG CCGGGCGAGC TGGCCGAACG CAAGCGTACG
CGTCGCGTCG TGTCGTTCGA CGATCTGCTC GCGAACCTGT ATCACGCACT GCACGCGCAC
CCGTGGCTTG CCGAGACGCT GCGCGCGCGC TATCCGGCCG CGCTGATCGA CGAATTCCAG
GATACCGACC CGCTGCAGTT CGCGATCTTC AACCGGATCT TCGCGCCGGG CGGGCCGCTC
TTTCTCGTCG GGGACCCGAA GCAGGCGATC TACAGCTTCC GCGCGGCGGA TCTGCATACC
TATCTCGCCG CACGGGCAAG CGCGAGCGCG TGCTATACGC TCGCGGTCAA CCAGCGCTCG
ACGCCGGCGA TCGTCGACGC GTGCAACCGC TTCTTCATGT CGAACCCGCG CGCATTCGTG
CTCGACGGGC TCGACTATTA CGCGGTGCGC GCCGGCACGC GCGTGCGTGC ACCGTTCGTC
GACGCAACCG ATCCGGGCCC GTCCGGCGAT TTCCGGATCT GGGCGCTGCC GGGCGGCGAT
GGCACGCTGC TCAAGCGCGA CGCGCAGGCG CAGGCCGCCC AGGCGTGCGC GGCCGAGATT
GCCAGGCTGA TGCGCGGCGC GCGCGAAGGG CATGCGCGGC TCGGCGATAC GCCGCTGTCG
CCGGGCGACA TCGCGGTGCT GGTGCAGACG CACCGGCAGG GCAGTCTCGT GAAGCGCGTG
CTCGCCACGT GGGGTATCGG CAGCGTCGAG CTCGCGCAGG CGTCGGTGTT TTCGACCGGC
GATGCGGAGC AGCTCGAGCG CGTGCTGGCG GCGATCGACG CGCCGGGCGA TTTGCGGCGC
TTGCGTTCGG CGCTGGCCGC CGACTGGTTC GGCCTCGATG CCGGTGCGCT GTGGCGGATG
GAGCAGGGCG ACGGCGACGC GTCGCGCGAA GCGGCGGACA GCGCGGACGC GATGAGCTGG
GTCGAGCGCT TCTCGCGCTA CCGGCTGCTG TGGCGCGAAC GCGGCTTCGC GGTGATGTGG
CGCACGTTCA CGCGCGAGCT GCGCATCGCC GAGCGGCTGA TGGCCGGCGC GGACGGCGAG
CGCCGCGTGA CCGACATCAA CCATCTGGCC GAACTGACGC AGGCGCGCGC GTCCGCGCAG
CCCGGCATCG CGCCGACGCT GCGCTGGCTC GCCGCGCAAC GGCTCGACGG TGGCGGCGAG
GAAGCCCAGC TGCGCCTGGA ATCCGACCGC AACCTCGTGC AGATCGTGAC CGTGCACAAG
TCGAAGGGCC TCGAATACGC GGTCGTGTTC TGTCCGTTCC TGAATGACGG CGGGCTGCGC
GAGCCGCCCG CGTCGGGGTT GCCGGACGCG CGCGAGTATC ACGACGACGC GGGCGACGCC
GTGCTGCATT ACGGGTGCGA CGACGAAGCC GCCGAGCATG CCGCGCGCCA GGCGCTGCGC
GAACAGGCGG CGGAACGCGC GCGGCTCGTC TACGTGGCGC TCACGCGCGC GGTGTATCGG
TGCTATCTCG TCGCCGGGCC TTATCTGTCG TCGCGCTCGA CCCGCGAGGC ACGGCGCAGC
GTGCTGAACT GGCTCGTGGC CGGCGCCGGC CAGTCGTTCG ACGCGTGGCT CGACGAGCCG
CCCGACGAAG CGGTGCTCGA CGCGGCGTGG CAAGCGCTGG CCGGCGGCCC CGTGAGCGTT
GCGCCGTTGC CGGTGCCGGC TCGGCGCGAA CGGCTCGCGG CCGGCCACGA TGCAACGCAG
ACGCTCGCGG CACGTCATGC GACGCGCGTG CTGCGCGACG CGTGGCGGAT GGCGAGCTTC
AGTTCGCTGA CGGCGTCGAT GGCGCGCGAG GAGGCGGGCG TCGCGGTCGT GCCGGACGAC
GAGCTTCGGC CCGATCACGA TGCGCTAGCC GCCGTGACGC CGGACGGCGC GTTCGTCGCG
GTCGACACGA TCGCTACCGA GCCGCCGGAC GACGACATCC TCCGGTTTCC GCGCGGCGCG
GCAGCGGGCG AGTGCCTGCA CCGCCTGTTC GAACTCAGCC GCTTCACGGA ACCCGATTCG
TGGCACCAGG CAGCGCTCGG CGCGCTGCAC GACCGGCCGG TCGAGGCCGA GCCCGAACTC
GCGACGCGTC TGCCGGCGAT GATGGCGCGG CTCGTCGACG ATGTCGTGCG TACGGAGCTC
GTGCCGGGCA TGCGGCTTGC GGATCTCGAC CCCGCGAGGC GGCTCGACGA AATGGGTTTC
CTGTTCCCGG CGCCGTCGCT CGAGCTGGGG GCGCTGCGCC GGCTGCTGGT GGCGCACGGC
TATCCGGACG TGGCGCTCGA CTCGGGCATG CTCGCCGGTT TCATCAAGGG TTTCATCGAC
ATGATCGTCG AACACGACGG CCGCTTCTGG ATCGTCGACT GGAAGTCGAA CCATCTTGGC
AATACGCCGG ATGCGTATGG CCCGCGGGCG CTCGACGTCG CGATGGCCGA TCACGCATAT
CACCTGCAGG CGCTGCTCTA TACGGTCGCG CTGCATCGCT ATCTGCGCGG GCGTCTGCCC
GACTACGACT ACGACACGCA TATGGCCGGC TACCTGTACC TGTTCGTGCG TGGCGTGCGG
CCCGACTGGC GCAGCGGCGG CGAACCGGCC GGCGTGCATG CGCGGCGGCC CGCGCGCGAA
CTCGTCGATG CACTCGACCG GATGATGGAA GGGGGCCGCG CATGA
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| Protein sequence | MSAASQPQAA LELDVFACPL DGVNQIEASA GTGKTWNICA LYVRLLLEKD LGADEILVVT
FTKAATAELH ERIRGRLAQL AHALDTGDDG GDPFVERLLE TTLGDAGTLD PETAAKRIRR
ALRAFDQAAI HTIHAFCQRA LQEAPFAAAM PFAFDMQADD AALRFELAAD FWRTRVEPIA
ARWPGFATWL VDSGAGPAAL DAQLARRLKK PLAALRWDGV VEPDESAEAA AAECFAEAAR
MWADERDAID ALLRAAQPAL NQRSHKPDAL ADALGAWTAH FAQGDAAAAL PKAALKLTRT
ALAKATKKGG VTPEHAFFDV ADALEAAVAA AEATQRARWL ALIADWLDTA PGELAERKRT
RRVVSFDDLL ANLYHALHAH PWLAETLRAR YPAALIDEFQ DTDPLQFAIF NRIFAPGGPL
FLVGDPKQAI YSFRAADLHT YLAARASASA CYTLAVNQRS TPAIVDACNR FFMSNPRAFV
LDGLDYYAVR AGTRVRAPFV DATDPGPSGD FRIWALPGGD GTLLKRDAQA QAAQACAAEI
ARLMRGAREG HARLGDTPLS PGDIAVLVQT HRQGSLVKRV LATWGIGSVE LAQASVFSTG
DAEQLERVLA AIDAPGDLRR LRSALAADWF GLDAGALWRM EQGDGDASRE AADSADAMSW
VERFSRYRLL WRERGFAVMW RTFTRELRIA ERLMAGADGE RRVTDINHLA ELTQARASAQ
PGIAPTLRWL AAQRLDGGGE EAQLRLESDR NLVQIVTVHK SKGLEYAVVF CPFLNDGGLR
EPPASGLPDA REYHDDAGDA VLHYGCDDEA AEHAARQALR EQAAERARLV YVALTRAVYR
CYLVAGPYLS SRSTREARRS VLNWLVAGAG QSFDAWLDEP PDEAVLDAAW QALAGGPVSV
APLPVPARRE RLAAGHDATQ TLAARHATRV LRDAWRMASF SSLTASMARE EAGVAVVPDD
ELRPDHDALA AVTPDGAFVA VDTIATEPPD DDILRFPRGA AAGECLHRLF ELSRFTEPDS
WHQAALGALH DRPVEAEPEL ATRLPAMMAR LVDDVVRTEL VPGMRLADLD PARRLDEMGF
LFPAPSLELG ALRRLLVAHG YPDVALDSGM LAGFIKGFID MIVEHDGRFW IVDWKSNHLG
NTPDAYGPRA LDVAMADHAY HLQALLYTVA LHRYLRGRLP DYDYDTHMAG YLYLFVRGVR
PDWRSGGEPA GVHARRPARE LVDALDRMME GGRA
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