Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1064 |
Symbol | astD |
ID | 4311245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1155313 |
End bp | 1156776 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148872 |
Product | succinylglutamic semialdehyde dehydrogenase |
Protein accession | YP_772957 |
Protein GI | 115351118 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGAAC TCTTCATCGA CGGCGCCTGG ATCGCAGGCT CGGGCCCCGC CTTCGCTTCG CGCAACCCGG GCACCGACGC GATCGCGTGG CAGGGCGACA GTGCGTCGGC AGCCGACGTC GACCGCGCGG TCGCGAGCGC GCGCCGCGCA TTCGCCGGCT GGTCGGCGCT CGACTTCGAA GCGCGCTGCG AAATCGTCAA GCGCTTCGCG GCGTTGCTCA CCGAGCGCAA GGAAGCGATC GCGACGGCGA TCGGCCGCGA GACGGGCAAG CCGCTGTGGG AAGCGCGCAC CGAAGTCGCG GCGATGGCCG CGAAGGTCGG CATCTCGATC CAGGCGTACC AGGAACGCAC CGGCGAGAAG CGCCAGGACA TGGCCGACGG CGTCGCGGTG CTGCGTCATC GTCCGCACGG TGTCGTCGCG GTGTTCGGCC CGTACAACTT CCCCGGCCAC TTGCCGAACG GCCATATCGT GCCGGCGCTG ATCGCGGGCA ACACGGTCGT GTTCAAGCCG TCGGAGCTCG CGCCGGGCGT CGCGCGCGCG ACGGTCGAGG TGTGGCAGGA AGCCGGCCTG CCGGCCGGCG TGCTGAACCT CGTGCAGGGC GAGAAGGACA CCGGCATCGC GCTCGCGAAT CACCGGCAGA TCGATGGCCT CTTCTTCACC GGCAGCTCGG ATACCGGCAC GCTGCTGCAC AGGCAGTTCG GCGGCCGTCC GGAAATCGTG CTCGCGCTCG AGATGGGCGG CAACAACCCG CTCGTGATCG GCGAAGTCGA GGACCTCGAC GCGGCCGTGC ACCACACGAT CCAGTCGGCG TTCCTGTCGG CCGGCCAGCG CTGCACGTGC GCACGCCGCA TCTTCGTGCC GCAGGGCGCG TTCGGCGAGC GCTTCCTCGC CCGCTTGGCC GACGTCACGT CGAAGATCAC GGCCGACGTG TTCGATGCCG ATCCGCAGCC GTTCATGGGC GCGGTGATCT CGGCGCGCGC GGCCGCGAAG CTCGTCGATG CGCAGTCGCG CCTGATCGAG CAGGGCGCGA AGCCGATCAT CGAGATGACG CAGCGCGATC CGCGCCTGGG TTTCGTGAAC GCGTCGATCA TCGACGTGAC CGGCGTGGCG AACCTGCCCG ACGAAGAGCA CTTCGGCCCG CTCGCGCAGA TCGTCCGCTA CGCGACGTTC GACGAAGCGA TCGAACGCGC GAACGACACG GCGTTCGGCC TGTCCGCCGG CCTGCTGGCC GACGACGCGC ACGCCTGGGA GCACTTCCGC CGCACGATCC GGGCGGGGAT CGTCAACTGG AACCGCCCGA CCAACGGCGC ATCGTCCGCC GCGCCGTTCG GCGGCACCGG TCGCTCGGGC AACCATCGTC CGAGCGCGTA CTACGCGGCC GACTATTGCG CGTATCCGAT GGCGTCGGTG GAAAGCACGC AACTGACCTT GCCCGCGAGC CTGTCGCCGG GCCTGCACTT CTGA
|
Protein sequence | MTELFIDGAW IAGSGPAFAS RNPGTDAIAW QGDSASAADV DRAVASARRA FAGWSALDFE ARCEIVKRFA ALLTERKEAI ATAIGRETGK PLWEARTEVA AMAAKVGISI QAYQERTGEK RQDMADGVAV LRHRPHGVVA VFGPYNFPGH LPNGHIVPAL IAGNTVVFKP SELAPGVARA TVEVWQEAGL PAGVLNLVQG EKDTGIALAN HRQIDGLFFT GSSDTGTLLH RQFGGRPEIV LALEMGGNNP LVIGEVEDLD AAVHHTIQSA FLSAGQRCTC ARRIFVPQGA FGERFLARLA DVTSKITADV FDADPQPFMG AVISARAAAK LVDAQSRLIE QGAKPIIEMT QRDPRLGFVN ASIIDVTGVA NLPDEEHFGP LAQIVRYATF DEAIERANDT AFGLSAGLLA DDAHAWEHFR RTIRAGIVNW NRPTNGASSA APFGGTGRSG NHRPSAYYAA DYCAYPMASV ESTQLTLPAS LSPGLHF
|
| |