Gene Bamb_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0972 
Symbol 
ID4311423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1062055 
End bp1062828 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID638148774 
ProductAzlC family protein 
Protein accessionYP_772865 
Protein GI115351026 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00116086 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGC GTCCCTTGAA TCCCCCATCC ACACCGTCGC CCCCGCCGCG CAGTCCATTC 
AACGAATGGC TCGACGGCGC GCGCGACACG ATCCCGATGA TGATCGGCGC GGCGCCGTTC
GGCGTGATCT TCGGCACGCT CGTCGCCGGC GGGCCGCTGG CCGCCTGGCA CGGCGCGCTG
ATGTCGCTCG CGGTGTTCGC GGGCTCCGCG CAGTTCATCG CACTCGGCCT GATCGCCGGC
AGCGCGAGCT TCGTCGTCGT GCTCGCGACG ACGCTGATCG TGAACCTGCG TCACCTGCTG
TACAGCGCGA CGCTCGCGCC GTACGTCGCG CACCTGCCGC TGCGCTGGCG CGCGACGCTC
GGCGCGCTGC TGACCGACGA GGTGTTCGCG GTCGCCTACT CGCACTACCG GCACTTCCCG
CCCGGTGCGA TCGGCCCCCA CTACTTCTTC GGTTCGGGCC TCGCGATGTA CCTGAACTGG
CAGGTCTGGA CGCTCGCGGG CATCGGCTTC GGCGCGGCCT TCCCGGGCCT CCAGTCGCTC
GGCCTCGATT TCGCGATGGC GGCGACCTTC ATCGCGATCG TCGTCCCGCA GCTCGGCAAG
CTGCGCTATT TCGCGGCCGC CGCGACAGCC GGCACGCTCG CCTACTTCTG GCAGGGCTGG
CCGTACAAGC TCGGGTTACT GGGCGCGGTC GCCGCCGGCG TCGCGGTCGG TGTCGCGCTC
ACGGTAAGGC ACAAGCGCTC GCGCACCGGT TCACGCACGG AGGCCGCATC GTGA
 
Protein sequence
MEKRPLNPPS TPSPPPRSPF NEWLDGARDT IPMMIGAAPF GVIFGTLVAG GPLAAWHGAL 
MSLAVFAGSA QFIALGLIAG SASFVVVLAT TLIVNLRHLL YSATLAPYVA HLPLRWRATL
GALLTDEVFA VAYSHYRHFP PGAIGPHYFF GSGLAMYLNW QVWTLAGIGF GAAFPGLQSL
GLDFAMAATF IAIVVPQLGK LRYFAAAATA GTLAYFWQGW PYKLGLLGAV AAGVAVGVAL
TVRHKRSRTG SRTEAAS