Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0967 |
Symbol | |
ID | 4311418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1058237 |
End bp | 1059625 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638148769 |
Product | MATE efflux family protein |
Protein accession | YP_772860 |
Protein GI | 115351021 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.932307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCATT CCGGTCTTAC GCGGACGGCC GCCGCGCCGC CCTCCCTGTC CAGTCACGCC GCCGATACCG CGCGCCTCGC CGCGCCGCTC GCGATCGCAC AGCTCTCGCA GATGGCGATG AGCGTCACCG ACACCGTGCT GCTCGGCTCG CTCGGCCCCG ATTCGCTCGC GGCGGGCGGC CTCGGCGCGA ACTACTTCTT CGTCATCGTG ACCGTGCTGC AAGGCGTGCT GTCGTCGGTC AGCGTGAGCG TCGCGCATGC GCGCGGCGCG CAGGCGGAGC ACCGCGTGCC GCACATCTAC TGGACCGGCT TCGTGCTGTC GTTGCTGCTC GCGATTCCGG CGATCGTCGC GCTGTCGCTG TCCGAACCGA TCCTGCTGAT GTTCCACGAG CCGCCGACGC TCGCGCATCA CGTCGGCGAA TACACCGGCA TCCTGCGGTT CGCGGCGCTC GGCAGCCTGA TCGGCGTCGG GCTGATGCGC GCCTTTCTCC CCGCGATCGG CGCCGCGCGG CGGCTGCTGT GGGTGTCGAT CGGCGGCGTC GGCGTCAACG CCGTGCTGAA CTACGGGCTG ATCCACGGCG CATTCGGCCT ACCGCGGCTC GGCTTCCTCG GCTCCGCGGT CGCGACGACC ATCACGATCT GGCTGACCGC GCTCGCGCTG ATCTGGCTGC TGCACGGCCG CGAGCGGTTC CGCCATTTCG TGACGGCCGC CCGCCCGAAA CTGCCCATGA TGGGCGAGCT GATCGGCATC GGCTGGCCGG TCGCGATCAC GTACGGGGTC GAATCGACGC TGTTTCTGGC GACGGGCCTG ACCGTCGGCG TGCTCGGCGC GACCTCGCTC GCCGCGCATC AGATCGCGCT GAACGTCGCA TCGCTCGCGT TCATGGTGCC GCTCGCGATC GGGCAGGCCG CGAACGTACG GGTCGGCTAC TGGGTCGGCG CCGGCGAGCC GGTCGCCGCA CGGCACGCGG GCTTCGTCGC GCTCGGCCTC GGCGTCGCGT TCATGTCGCT GTCGGGGCTC GTGCTGATCG TCGCGCCGCA TGCGATCGTC GGTCTGTACC TGCACCTCGA CGACCCGGCC AACGCGGCGA CCGTGTCGCT TGCCGCGTCG CTGCTCGGCA TCGCCGCGGT GTTCCAGATC GTGGACGGGA TGCAGACGGT CGCGTCGGGC GCGCTGCGCG GGCTGCGGGA TACGCGCATC CCGATGCTCG CGGCCACCCT CGGCTATTGG GGCATCGGCT TCCCGACCGG TTACTGGTTG GCGTTCCACG CGGGCCTCGG CGCACGCGGC CTGTGGTGGG GGCTCGCGGC CGGCCTCGCC AGCGTCGCCG TGCTGATGGC CTGTCGGTTT CACATGAAGA CCGCGTCGCT CATCGCGTCG GCGCGCTGA
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Protein sequence | MSHSGLTRTA AAPPSLSSHA ADTARLAAPL AIAQLSQMAM SVTDTVLLGS LGPDSLAAGG LGANYFFVIV TVLQGVLSSV SVSVAHARGA QAEHRVPHIY WTGFVLSLLL AIPAIVALSL SEPILLMFHE PPTLAHHVGE YTGILRFAAL GSLIGVGLMR AFLPAIGAAR RLLWVSIGGV GVNAVLNYGL IHGAFGLPRL GFLGSAVATT ITIWLTALAL IWLLHGRERF RHFVTAARPK LPMMGELIGI GWPVAITYGV ESTLFLATGL TVGVLGATSL AAHQIALNVA SLAFMVPLAI GQAANVRVGY WVGAGEPVAA RHAGFVALGL GVAFMSLSGL VLIVAPHAIV GLYLHLDDPA NAATVSLAAS LLGIAAVFQI VDGMQTVASG ALRGLRDTRI PMLAATLGYW GIGFPTGYWL AFHAGLGARG LWWGLAAGLA SVAVLMACRF HMKTASLIAS AR
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