| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0913 |
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| Symbol | |
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| ID | 4309472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1003850 |
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| End bp | 1004566 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148715 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_772806 |
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| Protein GI | 115350967 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTC CCCTTTCGAC CGGGCGGGCC GCGCTCGACG AGCCGCGCCT GCTGCACTGC
GCTGCGGTGC TGTTCGACCT CGATGGCACG CTCGCGGATA CGGCGCCCGA TCTCGCCGCA
GCCGTCAACA AGATGCAGCG CGTGCGCGGC CTGCCCGAAA CACCGCTCGA CGTGCTGCGC
CCGCTGGCAT CGGCCGGTGC GCGCGGCCTG CTCGGCGGCG CGTTCGGCAT CGACCCGCAA
TCGCCCGGCT ACGACGCGAT GCGCGACGAG TTCCTGGCCA ATTACGCGAC GGACATCTGC
GTGCACACGA CGCTGTTCCC AGGGATCGGC GACGTGCTCG ACGAACTCGA TACACGCGGC
GTGCGCTGGG GCATCGTCAC GAACAAGGTG ATGCGCCTCA CCGCCCCGCT CGCCGACCTG
CTTGGGCTGG CGCCGCGCGC GGCCTGCATC GTCGGGGGCG ACACAACGCC GCACTCGAAA
CCGCATCCGG CCCCGCTGCT GCATGCGGCC GAACAAATGA CGCTCGCGCC GGAACGCATC
GTCTACGTGG GCGACGATCT TCGTGACATC CAGGCCGGCA GCGCGGCAGG CATGGCGACG
GTCGCGGCCG CCTATGGTTA CTGCGGCGAC GGCGCCGCGC CGGGCGACTG GCAGGCGCAG
CATCTCGTCG GCTCGACGCA GGAACTCCGC GAACTGCTGC GCGATGTTGG GCTATAA
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| Protein sequence | MTTPLSTGRA ALDEPRLLHC AAVLFDLDGT LADTAPDLAA AVNKMQRVRG LPETPLDVLR
PLASAGARGL LGGAFGIDPQ SPGYDAMRDE FLANYATDIC VHTTLFPGIG DVLDELDTRG
VRWGIVTNKV MRLTAPLADL LGLAPRAACI VGGDTTPHSK PHPAPLLHAA EQMTLAPERI
VYVGDDLRDI QAGSAAGMAT VAAAYGYCGD GAAPGDWQAQ HLVGSTQELR ELLRDVGL
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