Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0895 |
Symbol | |
ID | 4308825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 984083 |
End bp | 987034 |
Gene Length | 2952 bp |
Protein Length | 983 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148697 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_772788 |
Protein GI | 115350949 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.99873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCG ACACGAACAA CGTCCGCCAA GGCGGCTGCG GCTCAGGCCA ATGCGCGTGC AAGAGCGCCG CCCAGGCGCG CGCCTTCGAT CCGTTCGACG ACACCGACTA CGGCACGCCG CAACGGCATG CCGATACCGA CGTCACGCTC GAAATCGACG GCCAGCCGGT GACGGTGCCG GCAGGCACGT CGGTGATGCG CGCCGCGATC GAAGCCGGCG TCAATGTGCC CAAGCTCTGC GCGACCGATT CGCTCGAGCC GTTCGGCTCG TGCCGTCTGT GCCTCGTCGA AATCGAAGGC CGGCGCGGCT ATCCGGCATC GTGCACGACG CCCGCCGAAG CCGGGATGAA GGTGCGTACG CAGTCGGACC GGCTGCAGTC GCTGCGCCGC AACGTGATGG AGCTGTACAT CTCCGATCAC CCGCTCGACT GCCTCACCTG CCCTGCCAAC GGCGACTGCG AGCTGCAGGA CATGGCGGGT GTCGTCGGCT TGCGCGAAGT GCGCTACGGC TTCGACGGCG CAAATCACCT GCGCGAGCAG AAGGACGAGT CGAATCCGTA CTTCACGTAC GATCCGTCGA AGTGCATCGT CTGCAACCGC TGCGTGCGCG CGTGCGAGGA AACCCAAGGC ACGTTCGCGC TGACGATCGC CGCGCGCGGC TTCGAATCGC GCGTCGCCGC CGGCGAAAGC GAATCGTTCA TGGACTCGGA ATGCGTATCG TGCGGCGCGT GCGTCGCCGC CTGCCCGACC GCCACGCTGC AGGAAAAATC CGTTGTCCGG CTCGGCCAGG CCGAGCACTC GGTCGTCACG ACCTGCGCGT ACTGCGGCGT CGGCTGCTCG TTCAAGGCCG AGATGAAGGG CACGCAGGTC GTGCGCATGA CGCCGCACAA GAACGGCCTC GCGAACGAAG GCCACGCGTG CGTGAAGGGA CGCTTCGCGT GGGGCTACGC GACCCACAAG GATCGCATCA CGAAGCCGAT GATCCGCGAG AAGATCACCG ACCCGTGGCG CGAAGTCAGC TGGGAAGAGG CGCTCACCTA CGCGGCGACG CAATTCCGCA AGCTGCAGCA GAAGTACGGC CGCGATTCGA TCGGCGGCAT CACGTCGTCG CGCTGCACGA ACGAGGAAAC CTACCTCGTG CAGAAGCTCG TGCGCGCCGC ATTCGGCAAC AACAACGTCG ACACCTGTGC GCGCGTGTGC CATTCGCCGA CCGGCTATGG CCTGAAGACG ACGCTCGGCG AATCGGCCGG CACGCAGACC TTCGCGTCGG TCGACCACGC CGACGTGATC GTCGTGATGG GTGCGAACCC GACCGACGGC CATCCGGTGT TCGGCTCGCG CCTGAAGCGG CGCATCCGCG AAGGCGCGAA GCTGATCGTG ATCGATCCGC GCCGCATCGA CGTGGTCGAC GGCCCGCACG TGAAGGCCGC GCACCACCTG CAGCTGCGCC CTGGCACCAA CGTCGCGATC GTCAACGCGC TCGCGCACGT GATCGTCACC GAAGGGCTCG TCGCCGACGC GTTCGTCGCC GAGCGCTGCG AAGCGCGCGC ATTCGAGCAA TGGCGCGACT TCGTGTCGCG TGCCGAGAAC TCGCCCGAAG CGACCGCCGA TGTGACGGGC GTGCCGGCCG AGGTGGTGCG CGAAGCCGCG CGCCTCTATG CGACCGGCGG CAACGCCGCG ATCTACTACG GCCTCGGCGT GACCGAACAC GCGCAAGGCT CGACGACGGT GATGGGCATC GCGAACCTCG CGATGGCGAC CGGCAACATC GGCCGCGAAG GCGTCGGCGT CAATCCGCTG CGCGGCCAGA ACAACGTGCA GGGCTCGTGC GACATGGGCT CGTTCCCGCA TGAGCTGCCC GGCTACCGCC ACATCGGCGA CGACAGCGTG CGCGCGCTGT TCGAACACGC ATGGTCGGCC ACGCTGCAAC CGGAACCGGG GCTGCGCATC CCGAACATGT TCGACGCGGC GCTCGACGGC AGCTTCAAGG GGCTTTACTG CCAGGGCGAG GACATCGTCC AGTCGGACCC GAACACGCAG CACGTCGCCG CCGCGCTGTC GTCGATGGAA TGCGTCGTCG TGCAGGACAT CTTCCTGAAC GAGACCGCGA AATACGCGCA CGTGCTGCTG CCGGGCTCGA CGTTCCTCGA GAAGGACGGC ACGTTCACGA ACGCGGAGCG CCGCATCTCG CGCGTGCGCA AGGTGATGCC GCCGCTCGCG GGCTACGCGG ACTGGGAAGT GACGCTGCTG CTGTCGCAGG CGCTCGGCTA CGACATGCAC TACACGCATC CGTCGGAAAT CATGGACGAG ATCGCACGGC TCACGCCGAC CTTCTCGGGC GTGTCGTACG CGAAGCTCGA CGCGCTCGGC AGTATCCAGT GGCCTTGCAA CGAACAGGCA CCGGACGGCA CGCCGACGAT GCACATCGAC GCGTTCGTGC GCGGCAAGGG CCGCTTCGTG ATCACGCAGT TCATTCCGAC GCCGGAAAAG GTCACGCAGC GCTATCCGCT GATCCTGACC ACGGGCCGCA TCCTGTCGCA ATACAACGTC GGTGCGCAGA CGCGCCGGAC CGAGAACGTC CAGTGGCATG AAGAGGACCG CCTCGAGATC CACCCGCATG ACGCGGAGGA TCGCGGGATC CGGACCGGCG ACTGGGTCGG CATCGAATCG CGTGCGGGCC AGACGGTGTT GCGCGCGCTC GTGTCCGATC GCATGCAGCC GGGTGTGGTG TACACGACGT TCCACTTCCC CGAATCGGGC GCGAACGTGA TCACGACGGA CAGCTCCGAC TGGGCGACGA ACTGCCCGGA ATACAAGGTC ACGGCCGTGC AGGTGATGCC GGTCGCGCAG CCGTCCGACT GGCAGCGTGC GTACGCGCGC TTCAACTCGG AGCAGCTCGA CCTGCTCGAG CGCCGCGCGG CCGCGCCGGC CGCCGTGACG ACGGGCAAGT GA
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Protein sequence | MSLDTNNVRQ GGCGSGQCAC KSAAQARAFD PFDDTDYGTP QRHADTDVTL EIDGQPVTVP AGTSVMRAAI EAGVNVPKLC ATDSLEPFGS CRLCLVEIEG RRGYPASCTT PAEAGMKVRT QSDRLQSLRR NVMELYISDH PLDCLTCPAN GDCELQDMAG VVGLREVRYG FDGANHLREQ KDESNPYFTY DPSKCIVCNR CVRACEETQG TFALTIAARG FESRVAAGES ESFMDSECVS CGACVAACPT ATLQEKSVVR LGQAEHSVVT TCAYCGVGCS FKAEMKGTQV VRMTPHKNGL ANEGHACVKG RFAWGYATHK DRITKPMIRE KITDPWREVS WEEALTYAAT QFRKLQQKYG RDSIGGITSS RCTNEETYLV QKLVRAAFGN NNVDTCARVC HSPTGYGLKT TLGESAGTQT FASVDHADVI VVMGANPTDG HPVFGSRLKR RIREGAKLIV IDPRRIDVVD GPHVKAAHHL QLRPGTNVAI VNALAHVIVT EGLVADAFVA ERCEARAFEQ WRDFVSRAEN SPEATADVTG VPAEVVREAA RLYATGGNAA IYYGLGVTEH AQGSTTVMGI ANLAMATGNI GREGVGVNPL RGQNNVQGSC DMGSFPHELP GYRHIGDDSV RALFEHAWSA TLQPEPGLRI PNMFDAALDG SFKGLYCQGE DIVQSDPNTQ HVAAALSSME CVVVQDIFLN ETAKYAHVLL PGSTFLEKDG TFTNAERRIS RVRKVMPPLA GYADWEVTLL LSQALGYDMH YTHPSEIMDE IARLTPTFSG VSYAKLDALG SIQWPCNEQA PDGTPTMHID AFVRGKGRFV ITQFIPTPEK VTQRYPLILT TGRILSQYNV GAQTRRTENV QWHEEDRLEI HPHDAEDRGI RTGDWVGIES RAGQTVLRAL VSDRMQPGVV YTTFHFPESG ANVITTDSSD WATNCPEYKV TAVQVMPVAQ PSDWQRAYAR FNSEQLDLLE RRAAAPAAVT TGK
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