Gene Bamb_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0880 
Symbol 
ID4308810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp967204 
End bp967860 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID638148682 
Producthypothetical protein 
Protein accessionYP_772773 
Protein GI115350934 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCACT GCGCGCCGCA TCAGGGCCCG GCGCGCGGTG GATCGTCGCT CGCACGCACA 
ACATCGGCCC GTGGAACCCC ATACGTGTCT CAAGCCTTCC TGATCTCCAC CGGCGCCGTC 
GCCCTCGCTG AAATCGGCGA CAAGACCCAA CTGCTGTCCC TCGTGCTGGC CGCGCGTTAT 
CGCAAGCCGG TGCCGATCAT TCTCGGCGTG CTCGTCGCGA CGCTCGTGAA CCATGGCTTT 
GCCGGTGCGT TCGGCGAGTG GCTCGGCATA CTCGTCACGC CGTCGATCAT GCGCTGGGCG 
CTCGCGTTCT CGTTCATCGC GATGGGGTTG TGGATCCTGG TGCCGGACAA GCTCGATGCC 
GACGAAGCCA ATGCGACCCG CTCGCGGCTC GGCGTGTTCG GCGCGACGCT CGTCGCGTTC 
TTCCTCGCGG AAATGGGTGA CAAGACGCAG ATCGCGACGG TCGCGCTCGC CGCGCGCTTC 
CAGGATTACA TCGGCGTGGT GGCCGGCACG ACCTTCGGGA TGATGCTGGC GAACGTGCCC 
GCGATCCTGC TGGGCGACCG TTTCGCGCAC CGGCTGCCGA CGAAGCTGGT GCACGGCATC 
GCGGCCGTGC TGTTCGTCGT GCTGGGCGTG CTGGCGTTGC TGGGCGTCGG GTTCTGA
 
Protein sequence
MVHCAPHQGP ARGGSSLART TSARGTPYVS QAFLISTGAV ALAEIGDKTQ LLSLVLAARY 
RKPVPIILGV LVATLVNHGF AGAFGEWLGI LVTPSIMRWA LAFSFIAMGL WILVPDKLDA 
DEANATRSRL GVFGATLVAF FLAEMGDKTQ IATVALAARF QDYIGVVAGT TFGMMLANVP 
AILLGDRFAH RLPTKLVHGI AAVLFVVLGV LALLGVGF