| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0863 |
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| Symbol | |
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| ID | 4310868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 948642 |
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| End bp | 949784 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638148664 |
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| Product | porin |
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| Protein accession | YP_772756 |
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| Protein GI | 115350917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000949722 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CCCTGATCGT CGCCGCATTG GCGGGCGTGG CTGCCAGCGC CGCCCATGCG
CAAAGCAGCG TCACGTTGTA CGGCCTGATC GATGCAGGCA TCACCTACAC GAACAACCAG
CACGGTCACA GCGCGTGGCA GGAAACGAGC GGCTCGATCA ACGGCAGTCG CTGGGGCCTG
CGCGGCACCG AGGATCTCGG CGGCGGCCTG AAGGCGATCT TCACGCTGGA AAACGGCTTC
GGCATCAACA ACGGCTCACT GAAGCAGAAC GGCCGCGAGT TCGGTCGACA GGCGTTCGTC
GGGCTCGCGC ACAACAGCTT CGGCTCGCTC ACGCTCGGCC GCCAGTACGA CAGCGTCGTC
GACTACCTCG GCCCGCTGTC GCTAACCGGC ACCCAGTACG GCGGCACGCA GTTCGCGCAT
CCGTTCGACA ACGACAACCT GAACAACTCG TTCCGGATCA ACAACTCGGT CAAGTACCAG
AGCGCGAACT ACGGCGGCCT GAAGTTCGGC GGGCTGTACG GCTTTTCGAA TTCCACCGGT
TTCGCGAACA ATCGCGCGTA CAGCGTCGGC GCGTCGTACA GCTACATGGG TTTCAACGTC
GCGGCCGCGT ACCTGCAGCT CAACAACAAC ATCAACGCGC TGGCGCTCGC GGCGAGCGAC
CCCGGCGCGG TGGCCGGCGA CTGGACCTTC GCGGCCAGCC GGCAGCGCAC CTGGGGCGCA
GGCCTGAACT ACACGTTCGG TCCCGCGACG GCCGGCTTCG TGTTCACGCA GACGCGCCTG
ACCAATTCGG CCGGGATCAG CGCCGGGCAG TCCGGCGTGT CGACCGGCAT CCCGCTCACC
GGCGGCACAC GCTTCAACAA TTACGAGGTG AATGGCCGTT ACGCGCTGAC GCCGGCGTTC
TCGCTCGCCG GCTCGTACAC GTACACCGAC AGCCGTCTCG ACGGCCAGAC GCCGAGCTGG
CATCAGTTCA ACCTGCAGGC CGACTATGCG TTGTCGAAGC GCACGGACCT GTACCTGCAG
AGCGAATATC AGCGGGTCAA TACCAATGGG CTGGCGATCG GCGCGAACAT CAACGGACTC
GGCGCCGCGT CGTCGACGAA CAAGCAGATC GCCGTCACGG CCGGCATGCG CCACCGCTTC
TGA
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| Protein sequence | MKKTLIVAAL AGVAASAAHA QSSVTLYGLI DAGITYTNNQ HGHSAWQETS GSINGSRWGL
RGTEDLGGGL KAIFTLENGF GINNGSLKQN GREFGRQAFV GLAHNSFGSL TLGRQYDSVV
DYLGPLSLTG TQYGGTQFAH PFDNDNLNNS FRINNSVKYQ SANYGGLKFG GLYGFSNSTG
FANNRAYSVG ASYSYMGFNV AAAYLQLNNN INALALAASD PGAVAGDWTF AASRQRTWGA
GLNYTFGPAT AGFVFTQTRL TNSAGISAGQ SGVSTGIPLT GGTRFNNYEV NGRYALTPAF
SLAGSYTYTD SRLDGQTPSW HQFNLQADYA LSKRTDLYLQ SEYQRVNTNG LAIGANINGL
GAASSTNKQI AVTAGMRHRF
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