| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0858 |
|---|
| Symbol | |
|---|
| ID | 4308525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 942911 |
|---|
| End bp | 943834 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638148656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_772751 |
|---|
| Protein GI | 115350912 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTACA GCATGACGGG CTATGCGAGC GCGACGCGCG AACTGGCGAC GGCCACCGGC
AACGGCGGCA CCAGCGTGTC GGTCGAACTG CGCACCGTGA ACTCGCGCTT CCTCGACCTG
AATTTCCGCA TGCCGGACGA CGTGCGCGCG TGCGAATCCG CGCTGCGCGA AATGCTGATG
AACAAGCTGT CGCGCGGCAA GGTCGACGTG CGCATCAACC TGCAGCGCGG CGAGCAGAGC
ATCGGCGCGG GCGCGCTGAA CCAGTCGGCG CTCGGCCAGC TCGCCGAGCT CGAACGCTCG
GTGCTCGACG CGTTCCCGGG TGTCGGCCGC CTGCGCGCGG GCGAGATCCT GCGCTGGCCC
GGCGTGCTCG CCGAGAGCGG CGTGTCGGCG GATGCGATCC GCGAGGCCGT GCTCGCGTGC
GGCAAGGAAG CGATCGGCGA GCTCGTCGTC GTGCGTTCGC GCGAAGGCGC GCAGCTGGCG
ACGATGCTGC TGTCGAACGT CACCGAAATG GAAGCGATCG TCGCGCGCAT CACGCCGCTG
GTGCCGGAGC TGATCGCGAA GCATCAGCAG AAGATCGTCG AGCGGCTGCA GGAAGCGCTC
GGCCTCGCGG CACCCGAAGG CAGCGCAGCG ATCGTCACGC GCGAGGAAGC CGCGGAACGC
ATTCGTCAGG AAGTGACGAT GTACGGCATC CGGATCGACA TCGCGGAAGA GCTGTCGCGA
CTTACCGCGC ACCTGAACGA AACGCGTCAC GTGATCGAGA AGGGCGGCCG CGTCGGCAAG
CGTCTCGACT TCATGATGCA GGAACTGAAT CGCGAAGCAA ACACGCTCGG CTCGAAGGCG
GCGGCGAAGG AACTGGCCGA CGCATCGATG GCGCTCAAGC TGTTGATCGA GCAGATGCGC
GAGCAAGTGC AAAACCTGGA GTAA
|
|---|
| Protein sequence | MIYSMTGYAS ATRELATATG NGGTSVSVEL RTVNSRFLDL NFRMPDDVRA CESALREMLM
NKLSRGKVDV RINLQRGEQS IGAGALNQSA LGQLAELERS VLDAFPGVGR LRAGEILRWP
GVLAESGVSA DAIREAVLAC GKEAIGELVV VRSREGAQLA TMLLSNVTEM EAIVARITPL
VPELIAKHQQ KIVERLQEAL GLAAPEGSAA IVTREEAAER IRQEVTMYGI RIDIAEELSR
LTAHLNETRH VIEKGGRVGK RLDFMMQELN REANTLGSKA AAKELADASM ALKLLIEQMR
EQVQNLE
|
|---|
| |