| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0836 |
|---|
| Symbol | lolA |
|---|
| ID | 4311567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 923776 |
|---|
| End bp | 924465 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638148632 |
|---|
| Product | outer-membrane lipoprotein carrier protein |
|---|
| Protein accession | YP_772729 |
|---|
| Protein GI | 115350890 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.234955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAC ATTCGTTTGC ATTGTCCCTT CGTTCGACGC GGCGCTGGCT CGGCGCGGCG
CTCGCCGGCG CATCGCTGAT GCTCGCGGCG ACGCACGCGT TCGCGAGCGG CACCGAGCAA
CTGAAGGCCT TCGTGTCGCA GGTGCGTTCG GCGAAGGGCG AATTCACGCA GCAGATCGTC
AAGGCGCCGA GCAAGGGCGC GAGCGCCGCG CAGGCCGCGC CGAAGCCGAA CGACAATTCG
AGCGGCACGT TCGTGTTCTC GCGTCCGGGC AAGTTCATCT GGACGTACCA GAAGCCGTAC
CAGCAGGTGC TGCAGGCCGA CGGCGACAAG CTGTACGTGT ACGACCGCGA CCTGAACCAG
GTCACCGAGC GCAAGCTGAA CGGCGCGCTG GGCGCGAGCC CGGCCGCGAT CCTGTTCGGC
AGCAACGATC TCGACAAGAA CTACACGCTG CGCGATGCGG GCGAGAAGGG CGGGATCGAC
TGGCTCGAGA TGCTGCCGAA GGCGCAGGAC ACGCAGTTCC AGCGGATCGG CATCGGGTTC
CGCAACGGCA CGCTCGCCGC GATGGAGCTG CACGACGTGT TCGGCAACGT CACGCTGCTC
ACGTTCACGA ACATCCAGAC GAATCCGCCG CTGAGGGGCG ATACGTTCAA GTTCGTCGTG
CCGAAGGGCG CGGACGTGAT CAACGGCTGA
|
|---|
| Protein sequence | MQQHSFALSL RSTRRWLGAA LAGASLMLAA THAFASGTEQ LKAFVSQVRS AKGEFTQQIV
KAPSKGASAA QAAPKPNDNS SGTFVFSRPG KFIWTYQKPY QQVLQADGDK LYVYDRDLNQ
VTERKLNGAL GASPAAILFG SNDLDKNYTL RDAGEKGGID WLEMLPKAQD TQFQRIGIGF
RNGTLAAMEL HDVFGNVTLL TFTNIQTNPP LRGDTFKFVV PKGADVING
|
|---|
| |