Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0821 |
Symbol | |
ID | 4309886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 904934 |
End bp | 906055 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638148617 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_772714 |
Protein GI | 115350875 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.578334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCGG ATACCGATTT CGCCCACATG CAGCGCGCGC TGACGCTCGC CGCGCGCGGC ATGTATACGA CCGCGCCGAA CCCGCGCGTC GGCTGCGTGA TCGTCAAGGA CGGCAACGTC ATCGGCGAAG GCTTCACGCA GCCGGCCGGC CAGGACCACG CGGAGGTGCA GGCGCTGAAG GACGCGCGTG CGCGCGGCCA TGACGTCGCC GGCTCCACCG TCTACGTGAC GCTCGAGCCG TGCAGCCACT TCGGCCGCAC GCCGCCGTGC GCGAACGCGC TGATCGACGC GCGCGTCGCG AAGGTCGTCG CGGCGATGGA AGACCCGAAC CCGCAGGTAT CGGGGCGCGG CCTCGGGATG CTGCGCGACG CGGGCATCGA CGTGCGCTGC GGGCTGCTCG CGAACGAAGC GGGCGAACTG AACATCGGCT TCGTGTCGCG GATGACGCGC GGCCGCCCGT GGGTGCGGAT GAAGACGGCC GCGTCGCTCG ACGCACGCAC CGCGCTGCCG TCCGGCGAAA GCCAGTGGAT CACCGGCGAG GCCGCGCGCC TCGACGGCCA CGCATGGCGC GCGCGTGCAT GCGCGATCCT CACCGGGATC GGCACGGTGC GGGAGGACAA CCCGCTCCTG ACGGTGCGCG GCATCGACAC GCCGCGCCAG CCGCAGCGCG TGCTGGTCGA CAGCCGCCTC GACCTGCCGC TCGATGCGCG CCTGCTCGAG GGTGCGCCGC TGCTGATCTT CTGCGGCCGG CTCGATGCGG CCGGCGAAGT GCGCGCGAAG GTGCTGAAGT CGCGCGGCGC GGAAATCGTG CCGCTCGCGA ATGCGCACGG CAAGGTCGAC CTGCCCGCGA TGCTCGCGGC GCTCGGCGCG CGCGGCGTCA ACGAACTGCA CGTCGAGGCC GGCCACAAGC TGAACGGTTC GCTGCTGCGC GAGCAGTGCG TCGACGAGCT GCTCGTCTAT CTCGCGCCGA GCCTGCTCGG CAGCGACGCG GCCGGCATGT TCGACCTCGC CGCGCCGGCG AGCCTCGACG CGCGCACGCG GCTCGCGTTC CACAGCGTCG AGCGGATCGG CGACGATCTA CGGATTCTCG CGCGCGTCGC GCCGCCGGCC GCCACCCACT GA
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Protein sequence | MFSDTDFAHM QRALTLAARG MYTTAPNPRV GCVIVKDGNV IGEGFTQPAG QDHAEVQALK DARARGHDVA GSTVYVTLEP CSHFGRTPPC ANALIDARVA KVVAAMEDPN PQVSGRGLGM LRDAGIDVRC GLLANEAGEL NIGFVSRMTR GRPWVRMKTA ASLDARTALP SGESQWITGE AARLDGHAWR ARACAILTGI GTVREDNPLL TVRGIDTPRQ PQRVLVDSRL DLPLDARLLE GAPLLIFCGR LDAAGEVRAK VLKSRGAEIV PLANAHGKVD LPAMLAALGA RGVNELHVEA GHKLNGSLLR EQCVDELLVY LAPSLLGSDA AGMFDLAAPA SLDARTRLAF HSVERIGDDL RILARVAPPA ATH
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