Gene Bamb_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0808 
Symbol 
ID4308991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp892621 
End bp893550 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content75% 
IMG OID638148604 
ProductNADP oxidoreductase, coenzyme F420-dependent 
Protein accessionYP_772701 
Protein GI115350862 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.7461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTCC CCGACACTCC CCGCCTCGGC TTCATCGGCG CCGGCCGCCT TGCACGCTGC 
GTCGCCCGGC GTTTCGCGGC GGCCGGCTTT CCGGTCGTCG CGATCGCGAG CCGCACGGCG
GAATCGGCCG CGGCACTTGC CGCGCACATA GATGGCTGCC GGGCGGTCGA CACGCCGCAG
CAGGTGGTCG ATGCGGCCGA CCTGATCTTC CTGACCGTGC CCGACGACCA TCTCGCGTCG
ACCGCCGCGG CGCTGCGGTT CGACGCCGCG CGCGCGGCGG GCCAGGCGCT CGTCCACTGC
AGCGGCGCGT CGGCGGTCGA GTTGCTCGAT CCGGCAAGAC GGCAAGGCGC GGCCACCGGC
GGCTTCCATC CGCTCTATCT GTTCGGCGGC ACGGACGCCG ATCTCGCCCG TATCGACGGC
TGCTCGGTCA CGCTCGAAGC CGACGGCGCG CTGCACGCGA CGCTGCTGCG GCTTGCTGCC
GCACTCGGCT GCCATCCGCT GTCGATTCCG GCCGGCGGCC GGATGCTCTA TCACGCGGCC
GCGCATTACG CGGCGAGCTT CGCGCTGTGC GGGCTGTCGG AAGCGGTCGA GCTATGGCGC
GGCCTCGGCT TCGACGAGGC CGCCGCGCTG CGCGCGCTGC TGCCGATGCT CGCCGGCACG
ATCGAGACCG CACGCGACAA GGGCCTCGCG AACGCCCTCG CGGGCCCGGT GTCGCGCGGC
GACACCGGCA TCGTCGAGCG CCAGCTCGCG CTGCTCGAGG CGCGCGGCGG CGATCACGCC
ACGCTGTATG CGCTGATGAC CCGCCGCGCG GTCGCGCTTG CGGCGAAGCG CGCCGCGCCG
CCGGCCGCGC TGCCGGCGCT CGCGCAGGCC GTCGAAACGT CGCTCGCGCG CACGACCGGG
CACCCCTCCC CGCCGCACGA CGAGGCGTGA
 
Protein sequence
MSLPDTPRLG FIGAGRLARC VARRFAAAGF PVVAIASRTA ESAAALAAHI DGCRAVDTPQ 
QVVDAADLIF LTVPDDHLAS TAAALRFDAA RAAGQALVHC SGASAVELLD PARRQGAATG
GFHPLYLFGG TDADLARIDG CSVTLEADGA LHATLLRLAA ALGCHPLSIP AGGRMLYHAA
AHYAASFALC GLSEAVELWR GLGFDEAAAL RALLPMLAGT IETARDKGLA NALAGPVSRG
DTGIVERQLA LLEARGGDHA TLYALMTRRA VALAAKRAAP PAALPALAQA VETSLARTTG
HPSPPHDEA