| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0689 |
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| Symbol | |
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| ID | 4309702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 767200 |
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| End bp | 767655 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148484 |
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| Product | putative Tfp pilus assembly protein PilE |
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| Protein accession | YP_772582 |
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| Protein GI | 115350743 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.786204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGGC CTGCGCGAAT GCGCCGAACA GCGGCGTTCA CGTTGCTCGA ACTGATGATC
GTGCTCGCGA TCGTCGCCGT GCTGGCCGGG TGGGGGATCC CGTCGTATCG CGAGCATGTC
GCGCGCATGC ATCGCGCATC CGCGGTGGCC GCGCTGTACC GTGCGGCTCA ATATCTCGAA
ATGCTCGACG GCCCGCCGCC GCAGAGCTTG CCGGACACCT ATGCGCAGGC GCCGCCGGAC
GGGGCGGCGG TCTATCGCGT CGCGCTGCGG CGAGCGGTCG GCGATGATGC AGCGGTCGTA
TATGAACTCG TTGCGAGCCC GCTCGATGCG GGCCCGATGC GCGACGACGC ATGCGGCGCA
TTCACGCTGC GTTCGGACGG GACGAAAGGC AATGCGGGAT CGATTGACGG CGGCGAGGCC
GATGCGCGGG AGCGCACATG CTGGGGCGTG CGTTGA
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| Protein sequence | MRRPARMRRT AAFTLLELMI VLAIVAVLAG WGIPSYREHV ARMHRASAVA ALYRAAQYLE
MLDGPPPQSL PDTYAQAPPD GAAVYRVALR RAVGDDAAVV YELVASPLDA GPMRDDACGA
FTLRSDGTKG NAGSIDGGEA DARERTCWGV R
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