Gene Bamb_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0657 
Symbol 
ID4311310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp738523 
End bp739716 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID638148451 
Productmajor facilitator transporter 
Protein accessionYP_772550 
Protein GI115350711 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCCAT CCCTGATTGC CATCCTCGCC ACGGTATTGC TCGACGCGAT CGGCGTCGGG 
ATCGTGATGC CGATCCTCCC CGGGCTGCTC CGCGCACTCG CGGGGGCCGG CAGCACCGAC
ACCCACTACG GGATCCTCCT CGCGCTCTAC GCGTTCGCCC AGTTCCTGTG CGCGCCGCTG
CTCGGCACGC TGAGCGACCG CTTCGGCCGG CGGCCCGTGC TGCTCGCGTC GCTTGCGGGC
GCCGCGCTCG ACTACTTGCT GATGGCGCTC GCACCGACGC TGGCGTGGCT TTACGTCGGG
CGGCTGATCG CCGGCATCAC CGGCGCGAAC GTCGCGGTCG CAACCGCATA CGTGACCGAC
GTCACGGCCG AACCCGACCG CGCACGGCGC TTCGGCCAGC TCGGCGCGAT GATGGGCGTC
GGCTTCATAG CGGGCCCGCT GATCGGCGGG TTGTTCGGCG CGCTGCACCT GCGCGCGCCG
TTCGTCGCGG CAGCGCTCCT CAATGCGCTG AACCTCGCGC TCGTGTGGCG CGCGCTGCCA
GAATCGCGTC CGCGCGCAGC CCGGGAAAGT CGCGGGCTCG CCACGCTCAA CCCGTTCGCC
GGCATGCGCC GGCTGAGCGG CGCGCCCGCG CTCGGCCCGC TGATCGGCAT CTACGTGATC
GTCGCGCTGG TGTCGCAGGC GCCCGCGACG CTGTGGATTC TGTACGGCCA GGAGCATTTC
GGCTGGTCCA CGCCGGTCGC CGGGCTGTCG CTCGCCGGCT ACGGCGCGTG CCACGCGCTC
GCGCAGGCCT TCGCGATCGG GCCGCTGATC GCACGGCTCG GCGAGCGCCG CGCACTCGCG
CTGGGTCTCG CGGGCGACGC GCTCGGGCTG GTGGTGATCG CGTTCGCGAC GGCCGCATGG
GTGCCGTTCG CGCTGCTGCC GCTGTTCGCC GCGGGCGGCA TGACGCTGCC GGCGTTGCAG
GCGATGCTCG CGCGTCAGGT CGACGATGCC CGACAGGGCG AACTGCAGGG CACGCTCGCG
AGCGTGGCGA GCCTGATCGG CGTCGCCGGG CCGCTTGTTG TCACGACAAC CTACGCGGCC
ACCCGCGGCA CGTGGCCGGG GCTCGTATGG GCCGCGGCGG CGCTGCTCTA TCTGCTGGTG
CCGCCGTTGC TGGCGGGCGC GCGCCCGACG AGCGCCCCGC GGCCGTCCAC GTGA
 
Protein sequence
MNPSLIAILA TVLLDAIGVG IVMPILPGLL RALAGAGSTD THYGILLALY AFAQFLCAPL 
LGTLSDRFGR RPVLLASLAG AALDYLLMAL APTLAWLYVG RLIAGITGAN VAVATAYVTD
VTAEPDRARR FGQLGAMMGV GFIAGPLIGG LFGALHLRAP FVAAALLNAL NLALVWRALP
ESRPRAARES RGLATLNPFA GMRRLSGAPA LGPLIGIYVI VALVSQAPAT LWILYGQEHF
GWSTPVAGLS LAGYGACHAL AQAFAIGPLI ARLGERRALA LGLAGDALGL VVIAFATAAW
VPFALLPLFA AGGMTLPALQ AMLARQVDDA RQGELQGTLA SVASLIGVAG PLVVTTTYAA
TRGTWPGLVW AAAALLYLLV PPLLAGARPT SAPRPST