| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0644 |
|---|
| Symbol | |
|---|
| ID | 4309291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 725021 |
|---|
| End bp | 725566 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638148438 |
|---|
| Product | heat shock protein GrpE |
|---|
| Protein accession | YP_772537 |
|---|
| Protein GI | 115350698 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA CGCAAGAGAA CCCGGCTACC CCATCGGCCG ATGACATCGG CAGCGAGAAG
CAGGCGGCGC AAGGCGCTGC TCCCGCCGCC GAAGCAGCCG ACGCGGCGCT CGCGGAGGCT
CAAGCCAAGG TCGCCGAGCT GCAGGAGAGC TATCTCCGGG CGAAGGCCGA GACGGAGAAC
GTCCGCCGCC GCGCGCAGGA CGACGTCTCG AAGGCGCACA AGTTTGCGAT CGAGAGCTTC
GCCGAGCACC TGCTGCCGGT GCTGGACAGC CTCGAAGCGG CCGTCGGCGA CACGTCCGGC
GACATCACGA AGGTGCGCGA AGGCGTCGAA CTGACGCTGC GCCAGTTGAC GAGCGCGCTC
GAGAAGGGCC GCGTCGTCGC GATCAACCCG GTTGGCGAGA AGTTCGATCC GCACCAGCAC
CAGGCGATTT CGATGGTGCC GGCCGAGCAG GAGCCGAACA CCGTCGTGAC GGTTCTGCAA
AAGGGCTACA TGATCGCCGA CCGCGTGCTG CGCCCGGCGC TCGTCACGGT CGCCCAGCCG
AAGTAA
|
|---|
| Protein sequence | MENTQENPAT PSADDIGSEK QAAQGAAPAA EAADAALAEA QAKVAELQES YLRAKAETEN
VRRRAQDDVS KAHKFAIESF AEHLLPVLDS LEAAVGDTSG DITKVREGVE LTLRQLTSAL
EKGRVVAINP VGEKFDPHQH QAISMVPAEQ EPNTVVTVLQ KGYMIADRVL RPALVTVAQP
K
|
|---|
| |