Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0636 |
Symbol | |
ID | 4309283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 716697 |
End bp | 718994 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148430 |
Product | carbohydrate-binding family V/XII protein |
Protein accession | YP_772529 |
Protein GI | 115350690 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.393474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGACTT TCCGTTCAAC CGGCGCCGTG CGCCCTCAAC GAGCTCGTCC CATCTTGAAA CCGATTCGTG TTGTCTTTGC CACGACGGCG CTGTCCGCTG CCGTCGTCGG ACTGTTCTCC GCTTCCGCCG GCGCCGCCGA GCCGGCATCC ACATCACTCA AGAACCTGTC GCGCGGCGAC GATCAGTGCC TGGCCTGGCA ACCGGCCGAC AACGCAGCGG TGTTCGCCGC GTGCGACGGC GGCGCCGCGC AGGACTGGAC CTTCGAGCCG CGCGGCGGCT TTCAGCGCAT CGTCAACACC GGCGCGAGCG CCGCGCGCGG CACCAGGATG TGCCTGCATT CGGCCGCGGG CGATACCGGC ATGGGGCGTG TGGCGGTCGG CGTGTGCGGC GAAGGCGACC AGACGATGCG CGACTGGCGG GCGGATCGCG GCCTCGACGG CCAGGTGGTG TTCGGCAACC GGTACCGGAT CAACACCGGC CGGACGGCCG AGGTGCTGGC CCCGCGCGAC GGCGGCGCCG GCGTCGCGAT GCAGAACGTG CGCGGCCAGC CGTCGTCGGT CTGGAGGTCG GCCGTGTCGA TTGCGCCGTC GCAGCGCCCG CTGCTCGGCG ACAAGTCCGT GCTGCTGATG GTGACGCACT TCAACGACTC GAAGCCTGCC GACAGCGAGG TCGTGCGCAA GGCGGTGTTC GGCGACGGCG ATGACCATTC GTCGCTGCGG CGCTATCTCG AGGTCGCGTC GCGCGGCAAG CTGACGCTGC ACGGGCAGAC GCTGGGCGGC GTCAATCTCG GCGACCGGCC CGCCACGTGC GATTCGGGCG CGATCCGCAC GGCCGCGCGC AACGCGGCGC TCGCGCGCGG CGTGAACCCG GACAAGTTCA ACTACCTGTT CGTCGATCTG CCGAAAATGA GCAGTTGCAA CTGGAGTGCT CTTGCCGCGA CGCCGGGCAA CTGGATTCTG TCGAACGCGA GCGGCCACGG CTACTGGATG TGGTCGCATG AGTTCGGTCA CAACCTGGGC GCGAAGCATC CGGGTTCGCT CGTCGATTGC CCGACGCCGG GCGGCACGGT CGAGGTCGGC GGCGCGTGCC GCGTTGGCAA GGTCGATGAT CCGTCGGACA CGATGGGCGG CGGCGGTCGG CGTTTGTATC CGGCGAGCTA TCAACTGTTC GCCGGCTGGC TGGGCGAGGC CGACGTGCCC GAGATCAACG GCAGCGGCAC CTATCGGCTC GCGCCGCTGT GGGGCGATGC GCCGGGCGCG AAGGCGTACC GTATCGCGCG CGCCGACGGT TCGACGCTGT GGCTCGAGTT TCGCCAGCCG CTACGCGGCT TCGACGACTG GAAGGCGGAC GATTCGTTCG TCAACGGCGT GATCGTGCGC ACCGTCGCGC ATGGCGGCAA CGTGCTGACG AACACGCTGG TCGACGCGAC GCCCGGCAGC GCGAACGGCA TGAAGGACGC GCCGCTGATG CCGGGCCATG CGCTGCACGA CACGTTGTCG GGCAAGATCG TCACCGTCAA GTCGGTCGGG CCGGACGGCG CCGTGGTCGA GGTGAAGAAT GACGGCCTGC TGATGCCCGA CGCGGTGGTC ACCGGCCCGC AGCAGGCGGC CGCGGGCACT GCGGTCGTGC TCTCGGGCGC GTCGTCGGCC GGCGACGCAT TGCGCTACAG CTGGGTGGTG CCGGTCGGCG TCGACGCGCA GCCGAACGGC GCGGAATTGC GTTTTGTCGC GCCGACGCTC GAACAGGATC GCGACTACGC GTTCGAGCTG ACCGTGGCGA ACGACAAGGG CTATACGTCG CAGGCGACCC ACGTCGTCAC GGTGAAGGCG CAGGAGATCG TCGCGCCGCC GCGCGCCACG ATCAGCGGGC CGGCGTCGGT CGACGGCGGC GCAGCCGTCA CGCTGTCCGG CGCGTCGTCG ACGGGCAAGG GGTTGAAGTA CGCGTGGACC GGGCCGGCCG GTGTGTCGAT CACGCAGAAC GGCGCGACCG CGACGTTCAC CGCGCCGAAG GCGACCGACG AGCGCCGCTA TGCGTTCAAG CTGGTGGTGA CCGACGCACT GGGCCGCAAG GCCGACGCGA CCCACGACGT GACCGTGCGT GCGTCCGCGG GCGAGGGCGC GGCTGCGTGG GATCCGAAGA AGACCTACGC GACACCGTGC CACGAGGTCA GCCATGCCGG CAAGACCTGG CTCAACGGCT GGTGGGTGCT TGGCGATGTG CCGGGCACGG GCGGCGAGTG GGGCGCATGG CGCGAGAAGG GCGTCGCGAA CATGCACGCG ATGTGCAAGA GCACGTAA
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Protein sequence | MRTFRSTGAV RPQRARPILK PIRVVFATTA LSAAVVGLFS ASAGAAEPAS TSLKNLSRGD DQCLAWQPAD NAAVFAACDG GAAQDWTFEP RGGFQRIVNT GASAARGTRM CLHSAAGDTG MGRVAVGVCG EGDQTMRDWR ADRGLDGQVV FGNRYRINTG RTAEVLAPRD GGAGVAMQNV RGQPSSVWRS AVSIAPSQRP LLGDKSVLLM VTHFNDSKPA DSEVVRKAVF GDGDDHSSLR RYLEVASRGK LTLHGQTLGG VNLGDRPATC DSGAIRTAAR NAALARGVNP DKFNYLFVDL PKMSSCNWSA LAATPGNWIL SNASGHGYWM WSHEFGHNLG AKHPGSLVDC PTPGGTVEVG GACRVGKVDD PSDTMGGGGR RLYPASYQLF AGWLGEADVP EINGSGTYRL APLWGDAPGA KAYRIARADG STLWLEFRQP LRGFDDWKAD DSFVNGVIVR TVAHGGNVLT NTLVDATPGS ANGMKDAPLM PGHALHDTLS GKIVTVKSVG PDGAVVEVKN DGLLMPDAVV TGPQQAAAGT AVVLSGASSA GDALRYSWVV PVGVDAQPNG AELRFVAPTL EQDRDYAFEL TVANDKGYTS QATHVVTVKA QEIVAPPRAT ISGPASVDGG AAVTLSGASS TGKGLKYAWT GPAGVSITQN GATATFTAPK ATDERRYAFK LVVTDALGRK ADATHDVTVR ASAGEGAAAW DPKKTYATPC HEVSHAGKTW LNGWWVLGDV PGTGGEWGAW REKGVANMHA MCKST
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