Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0612 |
Symbol | tgt |
ID | 4311553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 684417 |
End bp | 685604 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638148406 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_772505 |
Protein GI | 115350666 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.895388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG GTTCATCCCA CGATACGCAC GCGCCCGTGC AAGAGCGCCC GGCCAACGGG CTCGAATTCG AACTGCTGAC GACCGACGGC CATGCACGCC GCGGCCGCGT GAAGCTCAAC CACGGCGTGG TCGAGACGCC GATCTTCATG CCGGTCGGCA CGTACGGCAC CGTGAAGGCG ATCCAGCCGC GCGAGCTGCA CGAGATCAAG GCCCAGATCA TCCTCGGCAA CACGTTCCAC CTGTGGCTGC GCCCGGGCCT CGACACGATC GATGCGCATG GCGGCCTGCA CGGCTTCATG GGCTGGAACA AGCCGATCCT GACCGACTCG GGCGGCTTCC AGGTGTTCTC GCTCGGCGAC CTGCGCAAGA TCACCGAGGA CGGCGTCACG TTCGCGTCGC CGATCAACGG CGACAAGCTG TTCCTGTCGC CGGAAGTGTC GATGCAGATC CAGAAGGTGC TGAACTCCGA CATCGTGATG CAGTTCGACG AATGCACGCC GTACGCGACC AACGGCGTGC CGACGACGCA CAAGGAAGCG GCCGACTCGA TGCGCATGTC GCTGCGCTGG GCGAAGCGCT CGCTCGACGA GTTCGACCGG CTCGGCAACC CGAACGCCCT CTTCGGGATC GTCCAGGGCG GGATGTTCGA GGATCTGCGC GACGAATCGC TCGCGGGGCT GTCCGAGCTC GGCTTCCACG GCCTCGCGAT CGGCGGGCTA TCGGTCGGCG AGCCGAAGGA AGACATGATG CGCGTGCTGC GGCACGTCGG CCCGAAGCTG CCGGCCAACA AGCCGCACTA CCTGATGGGC GTCGGCACGC CGGAAGACCT GGTCGAGGGC GTCGCAAACG GCATCGACAT GTTCGACTGC GTGATGCCGA CCCGCAACGC GCGCAACGGC TGGCTGTTCA CGCGCTTTGG CGACGTGAAG ATCCGCAACG CGACGCACAA GAACTCGCTG AAGCCGCTCG ATGCGAGCTG CGGCTGCTAC ACGTGCCAGA ACTTCTCGCG CGGCTACCTG CATCACCTGC ACCGTGTCGG CGAAATCCTC GGCGCGCAGC TCAACACGAT CCACAACCTG CACTACTACC TGCAGCTGAT GGGCGAGATC CGCGACGCGA TCGAAACCCA TACGTTCGAC GCGTTCCGGC AGCGCTTCGC GGAGGATCGT GCGAGAGGGG TCGACTGA
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Protein sequence | MTEGSSHDTH APVQERPANG LEFELLTTDG HARRGRVKLN HGVVETPIFM PVGTYGTVKA IQPRELHEIK AQIILGNTFH LWLRPGLDTI DAHGGLHGFM GWNKPILTDS GGFQVFSLGD LRKITEDGVT FASPINGDKL FLSPEVSMQI QKVLNSDIVM QFDECTPYAT NGVPTTHKEA ADSMRMSLRW AKRSLDEFDR LGNPNALFGI VQGGMFEDLR DESLAGLSEL GFHGLAIGGL SVGEPKEDMM RVLRHVGPKL PANKPHYLMG VGTPEDLVEG VANGIDMFDC VMPTRNARNG WLFTRFGDVK IRNATHKNSL KPLDASCGCY TCQNFSRGYL HHLHRVGEIL GAQLNTIHNL HYYLQLMGEI RDAIETHTFD AFRQRFAEDR ARGVD
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