Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0602 |
Symbol | |
ID | 4311543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 674270 |
End bp | 675889 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148396 |
Product | hypothetical protein |
Protein accession | YP_772495 |
Protein GI | 115350656 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.483664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTC CGCAAGGCCC GCAGCACGAC GCGTCCCGGC CGCCCGACCC GTCGATCTCG ACGAAAAGCG GCTGGCTGCC GTCGCTCGTC TGGCTCGTGC CGCTGATCGC CGCGCTGATC GGCATCGGCC TCGTCGTCAA GTCCGTGCGC GAACGCGGCC CGGAAATCTC GATCAGCTTC CACAGCGCGG AAGGCCTCGA GCCGGGCAAG ACGCAGGTCA AGTACAAGGA CGTCGAGATC GGCATGGTCA AGACGATCAA GCTGTCGAAA GACCTGTCGC GCGTGCTCGT CCAGGTGCAA TTGAAGAAGG AAGCCGAGGA TTTCGCGGTC AAGGGCTCGC GCTTCTGGAT CGTGCGTCCG CGCGTCGGCG CGACCGGCGT GTCGGGGCTC GGCACGCTGC TGTCGGGCGC GTACATCGGC GTCGACGGCG GTCACGGGCA AGATACGCAG ACCGACTTCA CCGGGCTCGA ATCCCCGCCG GCCGTGACCG GCGACCAGAA GGGCACGCAG TACGTGCTGC GCGGCGATTC GCTCGGCTCC GTCGACATCG GCTCGCCCGT CTACTACCGC CGCGTGCAGG TCGGGCAGGT GGTCGGCTTC TCCCTCGACA AGGACGGCAC GGGCGTCACC TTCAACGTGT TCGTCAATGC GCCGTACGAC CAGTACGTCG GCGTGAACTC GCGCTGGTGG CAGGCGAGCG GCGTCGATCT GCGACTCGAT TCGAGCGGCC TCAAGCTGAA CACGCAGTCG CTCGCGACGG TGATCCTCGG CGGCATCGCG TTCCAGACGC CGCCGAACCA GGGCACGGGC GCGACCGCGC CGAACAACAC GACGTTCCGC CTCGGCTCCG ACGAGGGCGA CGCGATGCGC GATCCGGACG GCCAGCCGCT GCAGGTCGTG ATGAACTTCA ACCAGTCGCT GCGCGGGCTC GCCGTGGGCG CGCCGGTCGA CTTCCGCGGC ATCGTGCTCG GCGAAGTGAC GAACATCGGC ATCGACTACG ATCCGAAGAC CAAGAACTTC CTGATGCCGG TCACGATGAA CGTGTATCCG GAGCGGCTTG GCCGGCGGTT CCGCGAAACG ATCGAGAGCC AGGGCGAACC GGCCCGCCGC GACATCGTCG AGCGCCTCGT CAAGCACGGG CTGCGCGGCC AGCTGCGCAC CGGCAACCTG CTGACGAGCC AGCTGTACGT CGCGCTCGAC TTCTTCCCGA AAGCGCCGCC CGCGAAAATC GACACCACTC GCCAGCCGCT CGAGCTGCCG ACGGTGCCGA ACACGCTCGA CGAGCTGCAG CTGCAGGTCG CCGACATCGC GAAGAAGCTC GACAAGGTGC CGTTCGACCA GATCGGCGCG AACCTGAACA GCGCGCTGTC GAACGCCGAC AAGCTGTTCA AGCAGCTCGA CACGCAAATC GCGCCGCAAG CGCGCGACAC GCTGTCGGCC GCGCAGCAGA CCTTCTCGAC CGCCCAGGCG ACGCTGCAGC AGGATTCGCC GCTGCAGTCC GACGTGCGCG GCGCGCTGAA GGAACTCACG CGCACGCTGC AATCCCTGAA CGCGCTCGCC GACTATCTGG AGCGCCACCC CGAATCGCTG CTCAAGGGCA AGCCAGGAGA TCAACAATGA
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Protein sequence | MNSPQGPQHD ASRPPDPSIS TKSGWLPSLV WLVPLIAALI GIGLVVKSVR ERGPEISISF HSAEGLEPGK TQVKYKDVEI GMVKTIKLSK DLSRVLVQVQ LKKEAEDFAV KGSRFWIVRP RVGATGVSGL GTLLSGAYIG VDGGHGQDTQ TDFTGLESPP AVTGDQKGTQ YVLRGDSLGS VDIGSPVYYR RVQVGQVVGF SLDKDGTGVT FNVFVNAPYD QYVGVNSRWW QASGVDLRLD SSGLKLNTQS LATVILGGIA FQTPPNQGTG ATAPNNTTFR LGSDEGDAMR DPDGQPLQVV MNFNQSLRGL AVGAPVDFRG IVLGEVTNIG IDYDPKTKNF LMPVTMNVYP ERLGRRFRET IESQGEPARR DIVERLVKHG LRGQLRTGNL LTSQLYVALD FFPKAPPAKI DTTRQPLELP TVPNTLDELQ LQVADIAKKL DKVPFDQIGA NLNSALSNAD KLFKQLDTQI APQARDTLSA AQQTFSTAQA TLQQDSPLQS DVRGALKELT RTLQSLNALA DYLERHPESL LKGKPGDQQ
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