| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0470 |
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| Symbol | lpxC |
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| ID | 4311159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 533242 |
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| End bp | 534159 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638148263 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_772363 |
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| Protein GI | 115350524 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.615493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAGC AGCGCACCAT CAAATCGATC GTGAAGACCG TGGGTATCGG TCTGCACTCG
GGCCGCAAGG TTGAACTGAC GCTCCGTCCG GCCGCGCCGG GCACGGGGAT CGTTTTCTCG
CGCGTCGATC TGCCCACGCC TGTCGACATT CCGGCATCCG CGATGTCGAT CGGCGACACG
CGGCTCGCGT CGGTGCTGCA GAAGGATGGC GCGCGCGTGT CGACCGTCGA GCACCTGATG
TCGGCGTGCG CCGGCCTCGG CATCGACAAC CTCTATGTCG ACGTGACGGC CGAGGAAATC
CCGATCATGG ATGGCAGCGC CGCGTCCTTC GTGTTCCTGA TCCAGTCCGC GGGCATCGAG
GAGCAGAACG CGCCGAAGCG CTTCATCAAG GTGACCAAGC CGGTCGAAAT CCGCGACGGC
GACAAGTTCG CGCGTCTCGA GCCGTATTTC GGCTTCAAGC TGAAGTTCAC GATCGACTTC
CGTCATCCTG CCGTCGACAA GACCGGCCAG GAGCTCGAGG TCGACTTCGC GAACACGTCG
TACGTGCGCG AGATCGCGCG CGCGCGCACG TTCGGCTTTG CGCACGAAGT CGAAATGATG
CGCGAGCTGG GTCTCGCACG CGGCGGCAGC ATGGACAACG CGATCGTGCT CGACGAATAC
CGGATCCTGA ACAACGACGG GCTGCGCTAC GACGACGAGT TCGTGAAGCA CAAGATGCTC
GACGCGATCG GCGACCTGTA CGTGGTCGGC CATCCGCTGC TGGCGTCGTA CACGGCATAC
AAGTCGGGTC ACGGGCTGAA CAACGCGCTG CTGCGCGAAC TGCTCGCCCA CGAAGACGCG
TACGAGATCG TCACGTTCGA CGATCCGCAG GCCGCGCCGA AAGGATTTGC GTTCGACGCG
CAGACGGCCT TCGCCTGA
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| Protein sequence | MLKQRTIKSI VKTVGIGLHS GRKVELTLRP AAPGTGIVFS RVDLPTPVDI PASAMSIGDT
RLASVLQKDG ARVSTVEHLM SACAGLGIDN LYVDVTAEEI PIMDGSAASF VFLIQSAGIE
EQNAPKRFIK VTKPVEIRDG DKFARLEPYF GFKLKFTIDF RHPAVDKTGQ ELEVDFANTS
YVREIARART FGFAHEVEMM RELGLARGGS MDNAIVLDEY RILNNDGLRY DDEFVKHKML
DAIGDLYVVG HPLLASYTAY KSGHGLNNAL LRELLAHEDA YEIVTFDDPQ AAPKGFAFDA
QTAFA
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