Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0436 |
Symbol | trpC |
ID | 4309799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 487646 |
End bp | 488431 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148224 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_772329 |
Protein GI | 115350490 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGACA TTCTCGACCG AATCATCGCC GTCAAGCGCG AAGAAATCGC GGCGGCCATG CGCAGCGCGC CGCTCGAGGC ACTGAAGCTG GAAGCATCGG CGCGTGACCT GCGCGACTTC GTCGGCGCAC TGCGCGCGAA GCAGGCGGCC GGCCACGCGG CGGTGATCGC CGAAGTGAAG AAGGCGAGCC CGTCGAAGGG CGTGCTGCGC GAGCATTTCG TGCCGGCCGA CATCGCGCGC TCGTATGCGG CACATGGCGC CGCGTGCCTG TCGGTGCTGA CCGACGAGCA GTTCTTCCAG GGCAGCGTCC GCTACCTCGA GGAAGCGCGC GCGGCCTGCA CGCTGCCGGT GCTGCGCAAG GACTTCATCG TCGACGCGTA CCAGATCCTC GAAGCACGCG CGATGGGCGC CGACGCGATC CTGCTGATCG CGGCCGCGCT CGACACGCCG CTGATGCAGG ATCTCGAGGC GTATGCGCAC TCGCTCGGCC TCGCGGTGCT GGTCGAAGTC CACGACCGCG ACGAGATGGA ACAGGCGCTG ACGCTGAAGA CACCGCTGCT CGGCATCAAC AACCGCAACC TGCGCACGTT CGAGACGTCG ATCCAGACCA CGCTCGACAT GCTCGACATG ATTCCGCCGG AACGCATCGT CGTGACCGAG TCTGGGATCC TGTCGCGCAC CGACGTCGAC ACGATGCGCG CGGCGAACGT GAACGCGTTC CTCGTCGGCG AAGCGTTCAT GCGCGCCGAC CAGCCGGGCG AGGAACTCGC GCGGATGTTC TTCTGA
|
Protein sequence | MSDILDRIIA VKREEIAAAM RSAPLEALKL EASARDLRDF VGALRAKQAA GHAAVIAEVK KASPSKGVLR EHFVPADIAR SYAAHGAACL SVLTDEQFFQ GSVRYLEEAR AACTLPVLRK DFIVDAYQIL EARAMGADAI LLIAAALDTP LMQDLEAYAH SLGLAVLVEV HDRDEMEQAL TLKTPLLGIN NRNLRTFETS IQTTLDMLDM IPPERIVVTE SGILSRTDVD TMRAANVNAF LVGEAFMRAD QPGEELARMF F
|
| |