Gene Bamb_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0436 
SymboltrpC 
ID4309799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp487646 
End bp488431 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID638148224 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_772329 
Protein GI115350490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA TTCTCGACCG AATCATCGCC GTCAAGCGCG AAGAAATCGC GGCGGCCATG 
CGCAGCGCGC CGCTCGAGGC ACTGAAGCTG GAAGCATCGG CGCGTGACCT GCGCGACTTC
GTCGGCGCAC TGCGCGCGAA GCAGGCGGCC GGCCACGCGG CGGTGATCGC CGAAGTGAAG
AAGGCGAGCC CGTCGAAGGG CGTGCTGCGC GAGCATTTCG TGCCGGCCGA CATCGCGCGC
TCGTATGCGG CACATGGCGC CGCGTGCCTG TCGGTGCTGA CCGACGAGCA GTTCTTCCAG
GGCAGCGTCC GCTACCTCGA GGAAGCGCGC GCGGCCTGCA CGCTGCCGGT GCTGCGCAAG
GACTTCATCG TCGACGCGTA CCAGATCCTC GAAGCACGCG CGATGGGCGC CGACGCGATC
CTGCTGATCG CGGCCGCGCT CGACACGCCG CTGATGCAGG ATCTCGAGGC GTATGCGCAC
TCGCTCGGCC TCGCGGTGCT GGTCGAAGTC CACGACCGCG ACGAGATGGA ACAGGCGCTG
ACGCTGAAGA CACCGCTGCT CGGCATCAAC AACCGCAACC TGCGCACGTT CGAGACGTCG
ATCCAGACCA CGCTCGACAT GCTCGACATG ATTCCGCCGG AACGCATCGT CGTGACCGAG
TCTGGGATCC TGTCGCGCAC CGACGTCGAC ACGATGCGCG CGGCGAACGT GAACGCGTTC
CTCGTCGGCG AAGCGTTCAT GCGCGCCGAC CAGCCGGGCG AGGAACTCGC GCGGATGTTC
TTCTGA
 
Protein sequence
MSDILDRIIA VKREEIAAAM RSAPLEALKL EASARDLRDF VGALRAKQAA GHAAVIAEVK 
KASPSKGVLR EHFVPADIAR SYAAHGAACL SVLTDEQFFQ GSVRYLEEAR AACTLPVLRK
DFIVDAYQIL EARAMGADAI LLIAAALDTP LMQDLEAYAH SLGLAVLVEV HDRDEMEQAL
TLKTPLLGIN NRNLRTFETS IQTTLDMLDM IPPERIVVTE SGILSRTDVD TMRAANVNAF
LVGEAFMRAD QPGEELARMF F