Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0383 |
Symbol | |
ID | 4309729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 427925 |
End bp | 428428 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638148171 |
Product | hypothetical protein |
Protein accession | YP_772276 |
Protein GI | 115350437 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.211293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACATA TGCACTTGCA GTTTGGTAGT CCCGCGGTGA AGGGCGAGTC CGCGGACAAG GACCACCAGG GCTGGATCGA GCTGAAATCG TGGGATCACT CGATCGTTCA ACCGCGTTCG GCAACCGCAT CGACCGCTGG CGGTCACACG ATGACGCGTT GCGAGCACGG CGACATGATT TTCACGAAGG AAATCGATTC GTCGAGCCCG CTGCTGTACC AACACGCTTC GGGCGGCACC ACGTTCGACG AGGTGACGGT CCATTTCTCG CGCGCTGACG GTGAAGGCAA GCGCGTGCAG TATCTGGAAG TCAAGCTTAA GTACGTGATC ATCTCGAGCA TCGCCCCGAG CGTTCGCGAG GAAGGTCTGC CGCTCGAGAC GTTCTCGCTG AAGTACGCAG CTGTGCAGTG GAAGCAAACC CAGCAGAAGA TCGGCGGCAA CCAGGGCGGC AACACGCAGG GCGCCTGGAG TCTGACGAAG AACGACAAGA CCTACGCGGT CTAA
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Protein sequence | MLHMHLQFGS PAVKGESADK DHQGWIELKS WDHSIVQPRS ATASTAGGHT MTRCEHGDMI FTKEIDSSSP LLYQHASGGT TFDEVTVHFS RADGEGKRVQ YLEVKLKYVI ISSIAPSVRE EGLPLETFSL KYAAVQWKQT QQKIGGNQGG NTQGAWSLTK NDKTYAV
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