Gene Bamb_0380 details

Gene Information

• Locus tag: Bamb_0380
• ID: 4309726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 425150
• End bp: 425788
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638148168
• Product: TPR repeat-containing protein
• Protein accession: YP_772273
• Protein GI: 115350434

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0527182
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACC GTCTCTTCGC AAAACTTTCT GGGGTAGTGC TGGCTTGCGG CGTGATCGCC 
GGTTGCGCGA GCCAGCCGCC GGCGCCGACT GCCGAGGTGT TCAACAAGTC GCTGGCCGAT 
GCGGACGCCG TTGCGAAGTC GGGTGACCAG GACAAGGCGC TCGGCCTGTA CCAGCAACTC 
GCGAAGGCGG ATCCGACGCG CGAGGAGCCG TGGTCGCGCA TCGCGCAGAT CCAGTTTGCC 
CAGAACCACT ATGGCCAGGC GATCGTCGCC GCGCAGGAAG CGCTGCAGCG TGACGCGACC 
GACCGCCAGG CGAAGAGCGT GCTGGCCGTC GCGGGCCTGC GGATCGCGAC GCAGTCGCTC 
GGCGAATTGC GCCAGGACGC ATCGCTCGCG GGCGACGCGA AGTCGGACGC GCAGGCGCTC 
GCGAAGCAGC TGCGTGACAC GCTCGGCGAA TCGGCGCTGT TCCCGCCGGA GCAACGCGTC 
ACGAAGGCGC GTACGCCGCG CCGTATCGTT CATCGTCCGA AGGCCGGTGC GGCACCGGCC 
GCTGAAGCGG CAACGACCGC GCCGACGCCG CCTGCGGCAC CGCAGGCCGC CGCCGGGCAG 
AAGGGCGGGG CCGATCCATT CAGCGCGCTG CGCAACTGA 

 

Protein sequence

MKDRLFAKLS GVVLACGVIA GCASQPPAPT AEVFNKSLAD ADAVAKSGDQ DKALGLYQQL 
AKADPTREEP WSRIAQIQFA QNHYGQAIVA AQEALQRDAT DRQAKSVLAV AGLRIATQSL 
GELRQDASLA GDAKSDAQAL AKQLRDTLGE SALFPPEQRV TKARTPRRIV HRPKAGAAPA 
AEAATTAPTP PAAPQAAAGQ KGGADPFSAL RN