Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0380 |
Symbol | |
ID | 4309726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 425150 |
End bp | 425788 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148168 |
Product | TPR repeat-containing protein |
Protein accession | YP_772273 |
Protein GI | 115350434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0527182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACC GTCTCTTCGC AAAACTTTCT GGGGTAGTGC TGGCTTGCGG CGTGATCGCC GGTTGCGCGA GCCAGCCGCC GGCGCCGACT GCCGAGGTGT TCAACAAGTC GCTGGCCGAT GCGGACGCCG TTGCGAAGTC GGGTGACCAG GACAAGGCGC TCGGCCTGTA CCAGCAACTC GCGAAGGCGG ATCCGACGCG CGAGGAGCCG TGGTCGCGCA TCGCGCAGAT CCAGTTTGCC CAGAACCACT ATGGCCAGGC GATCGTCGCC GCGCAGGAAG CGCTGCAGCG TGACGCGACC GACCGCCAGG CGAAGAGCGT GCTGGCCGTC GCGGGCCTGC GGATCGCGAC GCAGTCGCTC GGCGAATTGC GCCAGGACGC ATCGCTCGCG GGCGACGCGA AGTCGGACGC GCAGGCGCTC GCGAAGCAGC TGCGTGACAC GCTCGGCGAA TCGGCGCTGT TCCCGCCGGA GCAACGCGTC ACGAAGGCGC GTACGCCGCG CCGTATCGTT CATCGTCCGA AGGCCGGTGC GGCACCGGCC GCTGAAGCGG CAACGACCGC GCCGACGCCG CCTGCGGCAC CGCAGGCCGC CGCCGGGCAG AAGGGCGGGG CCGATCCATT CAGCGCGCTG CGCAACTGA
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Protein sequence | MKDRLFAKLS GVVLACGVIA GCASQPPAPT AEVFNKSLAD ADAVAKSGDQ DKALGLYQQL AKADPTREEP WSRIAQIQFA QNHYGQAIVA AQEALQRDAT DRQAKSVLAV AGLRIATQSL GELRQDASLA GDAKSDAQAL AKQLRDTLGE SALFPPEQRV TKARTPRRIV HRPKAGAAPA AEAATTAPTP PAAPQAAAGQ KGGADPFSAL RN
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