| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0367 |
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| Symbol | |
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| ID | 4308806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 407315 |
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| End bp | 410488 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638148156 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_772261 |
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| Protein GI | 115350422 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC AGAACACGAT TGCCGCATTG CGCGGCGGGT TGCTTCAGCA GGACCGGCTG
CTGAAGCTCG ATACGCCATT GGGGGCCAAC GTGCTGACCG TGCAGCGGGC GGCCGGCCGT
GCCCGCATCG GGCGCGCATA CGAATTCACG CTCGACGTGC TGTCGGTCGA TGGCGATCTG
GAACTCAAAA AACTGATCGC GCAGCCCGTT ACGTTGTGGA TCCAGCAAGG CGATCGCAGC
TACCGGCCGG TCAACGGCTA CGTCCATACC GCGCGCCGCC TAGGCGCCGA CGGCGGGCTC
ACGACTTATC AGCTCACGTT CGCCGATTTC ACCCATTTCC TGAAGTTTCG TCGCGACCAG
CGCCTCTGGA ACGACACGAC CGTCGACCAG ATCATCAGCG ACGTGCTGAA TCAGCATCCG
CAAGCGCAGG GGCATTTTCG GTTTGCGCTG TCGAAGCCGC TGCCGAGCCG GTCATACACG
CGTCAGCACG ACACCGACTG GCATTTCGTG CACCGGCTGA TGGAGAGCGA AGGCCTCTAC
AGCACGTGGC AGCAGGCCGA CGACGGCAAG TCCCATACGC TCGTGATCAC CGACAACCTG
CAGGCGTTCG CGTCGCTGTC GCCGGAGACC GTGCGCTTCT ATCGCGGCGG CGCGGCGAGC
GAAGCCGACG CGTTCACGCA ATGGTCGGGC ACGCGCACGC TGCAGAGCGT GACGCGGACG
ACGCGCACGT TCGACTACAA GAATCCGTCG CAACCGTCGA ACCCGAAGGG CACGACGCTG
CCGACGATGG GCGGACAGGG CGAATTGCCC GACCAGCTCG AAGTCTACGA GTACACCGGG
GCGTACACGT ATCTGGACCA GACGCGCGGC GACCATCTGA CGAAGATCCG CATGGAGGAA
TGGGAGTCGC GGGCGAAGCG CTTCCATGGC GCGGGCGGCG TGCGCGCGAT CGATGCCGGC
CGGCGCTTCG TGCTGTCGGA TCATCCCGAG CACGATCGCG ATCCGGCAGA CCAGCGCGAG
TTCGCGGCGA TCGGTGTCGA GTGGTGGATC GAGAACAACT TGCCCGTCGC AAGCAGCAGC
GCGGACTTTC CGTACAGCCT GCGCGAAGCG TTGACGCAAG CGCAGGAAGG CTACGGTGCC
GATCCCGCGT TTCGCGTGCC GCATGACGAC GGCTCGGTCG GCTTCTACCT CGTCGAAGTT
GAAGCGCAGC GCGTGAGCGT GCCGTATCGC AGCCCGTTCG AACACGAGAA GCCGAAGATG
CATCTCGAGA CGGCGATCGT CGTCGGGCCG CAGGGCGAGG AAGTCTATAC CGACGAGTTG
AACCGGATTC GCGTGCAGTT CGTGTGGGAC CGTCTGAACC CGGGCAACGA GAACGCGTCG
TGCTGGGTGC GCGTGGTGCA GTCGGATACA GGTGGCGGCT ACGGCGGCGT GCATGTGCCG
CGCATCGGCG AGGAAGTGCT GATCGACTAT GTCGGCGGCG ATTGCGACCG GCCGCTCGCG
GTCGGACGCG TGTACAACGG CGCGAACCAG CCGCAGTGGC ATAGCGACGG GATTCTGTCC
GGATATCGGT CGAAAGAGTA TTCGGGCGGC GGCTACAACC AGCTCGTGAT GGACGACGCG
ACCGGGCAGA ACCGCGTGCA ACTGATGAGC AGCAGCGCGA ACAGCCTGCT GCATCTGGGC
TACATCATCG ACCAGAACGG CAATTCGCGC GGCTCGTATC TGGGCAGCGG GTTCGACCTG
CGCTCGGATG CGTATGGCGC GGTACGGGCG AGCCAGGGCC TGTACGTCAC CACCCATCCG
AAGGCGCCGA ACAGCCAGCC GCTCGACGTG AAGGAGGCGC AGCAGCAGCT CGTGACGGGG
GAGAGCCTGG TCGAGGCGAT GTCGGGCGTC AGCGAGCAGC ATCAGGCGGA GAGCCTGAAG
GACGCGCAAG ACACGATGCG CGCGTTCACC GACGCAACGC AGAACAACGT ATCGGGCAGC
ACGTCGGGCG GGCGAACGGC AGGCGGCGGC ACGGGCAGCG CGAACGCATT CAAGGAGCCG
GTGATGCTGT TCGGCAGCCC GTCAGGGATC GGGATGTCGA CGCAACAGTC GCTGCACATG
GTCGCGAACG ATCACGTGAA CGTCGCGAGC GGACAGAGCG TGCATGTCGC GGCGGGCAAG
TCGCTGATCG GCAGTATTGG GCAGAAGCTG AGCGTGTTCG TGCAGAACGC GGGGATGAAG
CTGTTCGCTG GCAAGGGCAA GGTCGAGATC CAGGCGCAGT CGGACAACGT CGAGGTGACC
GCGCAGAAGG CGGTGAAGGT TGTGTCCGCA ACCGACCGGA TCGAGATCGC GGCTGATCAG
GGAATTCTGC TGACCAGCGG CGGCGGGTAT ATCCGCATCC AGGGCGGCAA CATCGAGATT
CATACGCCGG GCGCGGTGGA CGTGAAGGGC GCGTCGCATA CGTTCGCGGG GCCGGCAAGC
ATGGGCTATC CGCTGCCGAG CCCGCGGCCG GATCAGCCGG GGCAGCTCGA GCTGATTCAC
AAGTACGTGA ACGGCGAAGC GGTGAAGGGT GGGTTGTTCA CGGTGAAAGA CGTGAACGGC
GCCGTGCTGA AGAAAGGCGC GCTCGACAAC AGTGGCTATA CGGTCGTGAG CGGTTTGCCG
CCGGGCGCGG TACGCGTCGA GTTCGGGAAG GACCCGCGCG AGTCGGATCA GCCGGCGAAT
TACTTCAAGC AGGTGAAGTG GCCGGCAGAG CCGGTCGAGC CGTCGCCGGA AGCCGCGCAG
GCAGCGGCGA GCGGGCAGCT TGCGAGCCAG TTGCAGGGAA TGGCGCCCGC GGCGACCACG
GCGGCGATGG GGCTCGCGAG CGGCGGCAGC GCGGGCGCTG TGCTTGGCGG CCTCGCGAGT
TCCGCATTGC CGGCTGCCGC GAGTGCACTC GGTGGGGCGG GCGTCGTGTC GGCGTTGCGG
ACGGCGTCCA GCCTGAGCGG TGCAGCGAAG CAGGTGGCCG GGATGGTGCA GGCCGCACGT
CAGGGTGGAC TTGCGGCGCT GGCCGCGCCG GCCGCGAATG CCGCGTCCGG GGCGCTGCAG
GGAGCGTTAC CCGGCGTCGC TGGAATCTCG GGCAAGGGCG CCACGACGGT GGCGTCAGCC
GCGGGCGGCA TGAAGCTGCC GACCCCCGGG TTTGGCGGAC CGCTGAAATC CTGA
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| Protein sequence | MNMQNTIAAL RGGLLQQDRL LKLDTPLGAN VLTVQRAAGR ARIGRAYEFT LDVLSVDGDL
ELKKLIAQPV TLWIQQGDRS YRPVNGYVHT ARRLGADGGL TTYQLTFADF THFLKFRRDQ
RLWNDTTVDQ IISDVLNQHP QAQGHFRFAL SKPLPSRSYT RQHDTDWHFV HRLMESEGLY
STWQQADDGK SHTLVITDNL QAFASLSPET VRFYRGGAAS EADAFTQWSG TRTLQSVTRT
TRTFDYKNPS QPSNPKGTTL PTMGGQGELP DQLEVYEYTG AYTYLDQTRG DHLTKIRMEE
WESRAKRFHG AGGVRAIDAG RRFVLSDHPE HDRDPADQRE FAAIGVEWWI ENNLPVASSS
ADFPYSLREA LTQAQEGYGA DPAFRVPHDD GSVGFYLVEV EAQRVSVPYR SPFEHEKPKM
HLETAIVVGP QGEEVYTDEL NRIRVQFVWD RLNPGNENAS CWVRVVQSDT GGGYGGVHVP
RIGEEVLIDY VGGDCDRPLA VGRVYNGANQ PQWHSDGILS GYRSKEYSGG GYNQLVMDDA
TGQNRVQLMS SSANSLLHLG YIIDQNGNSR GSYLGSGFDL RSDAYGAVRA SQGLYVTTHP
KAPNSQPLDV KEAQQQLVTG ESLVEAMSGV SEQHQAESLK DAQDTMRAFT DATQNNVSGS
TSGGRTAGGG TGSANAFKEP VMLFGSPSGI GMSTQQSLHM VANDHVNVAS GQSVHVAAGK
SLIGSIGQKL SVFVQNAGMK LFAGKGKVEI QAQSDNVEVT AQKAVKVVSA TDRIEIAADQ
GILLTSGGGY IRIQGGNIEI HTPGAVDVKG ASHTFAGPAS MGYPLPSPRP DQPGQLELIH
KYVNGEAVKG GLFTVKDVNG AVLKKGALDN SGYTVVSGLP PGAVRVEFGK DPRESDQPAN
YFKQVKWPAE PVEPSPEAAQ AAASGQLASQ LQGMAPAATT AAMGLASGGS AGAVLGGLAS
SALPAAASAL GGAGVVSALR TASSLSGAAK QVAGMVQAAR QGGLAALAAP AANAASGALQ
GALPGVAGIS GKGATTVASA AGGMKLPTPG FGGPLKS
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