Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0343 |
Symbol | hisD |
ID | 4309236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 387189 |
End bp | 388505 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148131 |
Product | histidinol dehydrogenase |
Protein accession | YP_772237 |
Protein GI | 115350398 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATCA CCATCCGCAA ACTCGATTCG ACGAGCGACG GCTTCGGCGC CGCGCTGCGC GCGCTGCTCG CGTTCGAGGC AAGCGAGGAC GAAGCGATCG AGCAATCGGT CGCGCAGATC CTCGCCGACG TGAAGTCGCG CGGCGACGCC GCGGTGCTCG AGTACACGAA CCGTTTCGAC CGGCTGGACG CGAGCAGCGT CGCCGCGCTC GAACTGCCGC AGGACGCGCT GCAGACGGCG CTCGACGGCC TCGCGCCGAA GGCGCGCGCG GCGCTGGAAG CGGCCGCCGC CCGCGTGCGT GCGTACCACG AGAAGCAGAA GATCGAGTGC GGCACGCATA GCTGGCAGTA CACGGAAAGC GACGGCACGG TGCTCGGCCA GAAGGTCACG CCGCTCGACC GCGTCGGCCT GTACGTGCCG GGCGGCAAGG CCGCGTATCC GTCGTCGGTG CTGATGAACG CGATTCCCGC GCGGGTCGCG GGCGTCGGCG AGATCGTGAT GGTCGTGCCG ACCCCGGACG GCGTGAAGAA CGACCTCGTG CTCGCCGCGG CGCTGCTCGG CGGCGTCGAT CGCGTGTTCA CGATCGGCGG CGCGCAGGCG GTCGGCGCGC TCGCGTACGG CACGGCCACG GTGCCGGCGG TCGACAAGAT CTGCGGGCCG GGCAATGCGT ACGTCGCATC CGCGAAGCGC CGCGTGTTCG GCACGGTCGG CATCGACATG ATCGCCGGCC CGTCGGAAAT CCTCGTGCTG TGCGACGGCA CGACCGATCC GAGCTGGGTC GCGATGGACC TGTTCTCGCA GGCCGAACAC GACGAGCTCG CGCAGTCGAT CCTGCTGTGC CCGGACGCCG CGTTCCTCGA GCGCGTCGAG AAGGCGATCG ACGAGCTGCT GCCGACGATG CCGCGCCGCG AGGTGATCCG TGCGTCGCTC GAAGGCCGCG GCGCGCTGAT CAAGGTGCGC GACATGGCCG AAGCGTGCCG GATCGCGAAC GACATCGCGC CCGAGCACCT CGAGATTTCC GCGCTGGAGC CGCAGCAATG GGGCCAGCAG ATCCGCCACG CCGGCGCGAT CTTCCTCGGC CGCTACACGA GCGAAAGCCT CGGTGACTAC TGCGCGGGCC CGAACCACGT GCTGCCGACG TCGCGCACCG CGCGCTTCTC GTCGCCGCTC GGCGTGTACG ACTTCATCAA GCGCTCGAGC CTGATCGAAG TCAGCGCCGA AGGGGCGCAG ACGCTCGGCG AAATCGCCTC CGAGCTCGCG TACGGCGAAG GGCTGCAGGC GCACGCGCGC AGCGCCGAGC TGCGGATGAA GGGGTGA
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Protein sequence | MAITIRKLDS TSDGFGAALR ALLAFEASED EAIEQSVAQI LADVKSRGDA AVLEYTNRFD RLDASSVAAL ELPQDALQTA LDGLAPKARA ALEAAAARVR AYHEKQKIEC GTHSWQYTES DGTVLGQKVT PLDRVGLYVP GGKAAYPSSV LMNAIPARVA GVGEIVMVVP TPDGVKNDLV LAAALLGGVD RVFTIGGAQA VGALAYGTAT VPAVDKICGP GNAYVASAKR RVFGTVGIDM IAGPSEILVL CDGTTDPSWV AMDLFSQAEH DELAQSILLC PDAAFLERVE KAIDELLPTM PRREVIRASL EGRGALIKVR DMAEACRIAN DIAPEHLEIS ALEPQQWGQQ IRHAGAIFLG RYTSESLGDY CAGPNHVLPT SRTARFSSPL GVYDFIKRSS LIEVSAEGAQ TLGEIASELA YGEGLQAHAR SAELRMKG
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