Gene Bamb_0268 details

Gene Information

• Locus tag: Bamb_0268
• Symbol: rplD
• ID: 4310278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 320228
• End bp: 320848
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638148056
• Product: 50S ribosomal protein L4
• Protein accession: YP_772162
• Protein GI: 115350323
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000119907
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTCA AGCTCCTGAA CGAAAATGGT CAGGAAGGTG CAGTGGTCAA CGCGTCGGAC 
GTCGTGTTCG GTCGTGACTA CAACGAAGCG CTGATCCACC AGGTCGTCGT CGCGTACCAG 
GCGAATGCTC GCCAGGGTAA CCGCGCACAG AAGGACCGTG AGCAAGTCAA GCACACCACC 
AAGAAGCCGT GGCGTCAGAA GGGTACGGGC CGCGCTCGTG CCGGTATGTC GTCGAGCCCG 
CTGTGGCGTG GCGGTGGTCG CATCTTCCCG AACTCGCCGG AAGAAAACTT CTCGCACAAG 
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAGCT GGCCCGTGAA 
GGCCGTCTGT CGGTCGTCGA GGACATCATC CTCGAAGCGC CGAAGACCAA GCTGCTGGCT 
GACAAATTCA AGACCATGGG TCTCGACTCC GTGCTGATCA TTACGGATAC GGTCGACGAG 
AACCTGTACC TGGCTTCGCG CAACCTGCCG CACGTGGCGA TTGTCGAGCC GCGCTACGCT 
GACCCGCTGT CGCTGATCTA CTTCAAGAAA GTGCTGGTCA CGAAGGCTGC GGTCGCCCAG 
ATCGAGGAGT TGCTGTCATG A 

 

Protein sequence

MELKLLNENG QEGAVVNASD VVFGRDYNEA LIHQVVVAYQ ANARQGNRAQ KDREQVKHTT 
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSHK VNKKMHRAGL CSIFSQLARE 
GRLSVVEDII LEAPKTKLLA DKFKTMGLDS VLIITDTVDE NLYLASRNLP HVAIVEPRYA 
DPLSLIYFKK VLVTKAAVAQ IEELLS