| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0151 |
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| Symbol | |
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| ID | 4310893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 179553 |
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| End bp | 182054 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638147930 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_772046 |
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| Protein GI | 115350207 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCGA TTGAACTGCA ATTGCGCGCG GCGCTCGCGC ATCACGAGGC TGGACGTCTC
GGGGAAGCGA AGGCGTTGTA CGACGCGATC CTGCACGCGG AGCCCGGGCA GCCCGATGCG
ATGCACTTCC TCGGGCTGCT CGCGTGCCAG CTGAAGCAGT ACGACGCGGG CCTTGCCCTG
ATGGAGCGCT CGCTAGCCGC GCGGCCGGAC GCGTCATATT TCAACAACCT CGGCAACATG
CTGCGCGAAT GCGGGCGGCT CGACGACGCG ATCGCGCACT ACCGTCGCGC GGTGGCGTTG
CGTCCGGACT ATCCGGAAGC GCACAACAAC CTCGGCAACG CGCTGCGCGA CGCGCGCGAT
CCGGCCGAGG CGATGCAGAG CTGTTCGCGC GCGATCGAAT TGCGTCCCGG TTATGCGGAG
GCATACAACA ACCTCGGCAA CGTGCTGCAG GACCTGGGCG AGCTGGATGC GGCCGCGGCG
AGCTACGGCA AGGCGATCGC CTTCCATCCC GCGTATGCGG AAGCGCACAG CAACCTCGGC
AACGTGCTGC GCACACAGGA GCGGCACGCG GACGCGATCG TTCATTACCG CCGCGCGATC
GAATTGAGTC CTGCGCTGCC CGCCGCGTGT CACGGCCTCG GCCTGTCGCT GTGGGCGCTC
GGCGAACTGA GCGAAGCCGT GAGCGTGCTG GGCGCCGCCG CGGCCGGGTC CGACGACGCG
AGCCTGCACA ACAACTACGC GGGCGTGCTG CGCGACGCGG GTGACCTCGA CGCCGCCGCG
GCGCACTACG CACGCGCGAT CGCGCTCGAT GCGTCGCTAG CCGCCGCGCA TGCGAACTTG
AGCGGCGTGC GCCGCCGTCA GGCGCGTTAT GCGCAAGCGC TCGTGCATGC GCAGGAGGCG
ATCCGCATCG CACCGCATCT CGCCGATGCG CACAACCAGG CGGGCAACGC TCACCACGGC
CTGGGCGATC TCGTCGCGGC GCAAGCGTGC TACCGCACCG CGCTCGAGCT GAATCCGGCC
GACAGCGGCA CGTGCCACAA CCTGTCCGTC GTGCTGCTCA AGCGCGAGCG GCACGCCGAT
GCGCTCGCGT ATTGCCGGCA GGCGCTGGCG GGCGGCCGCC CGACCGTGTC GATGTACGTG
AATCTTGGCG ACATCCTGCG TGCGCAGGGC AACGTCGACG CCGCGGTGCC CGCGTATCGC
GATGCGCTTG CGCTGGTGCG CGACGACGCG AGCGACGATG CGGCGGAGGT GCTCGGCCGC
CTGCTGTTCG CCGCCGCGGC ATCGGCGACC GTATCCCCCG CCGACTATCT GAATGACGCG
CGCCGCTACG GCCGCCACCT CGCGGCGCGT TCGACGCGCT ATACGCATGA CGTGCGCGCA
CGCGCGGCCG ACGCGCTGCA CCGCCCGCTG CGGGTCGGCT TCGTATCGGG CGACTTGCGG
CAGCACCCGG TCGGGATCTT CGTCGAAAGC GTGTTCGCGC ATCTCGATCG CACGCGCGTT
GCGCCATACG TGTACACGAC GTCGGACGAA GCGGACGCGA TCACCGCACG GCTGAAGCCG
CATGCGGCCG TCTGGCGTTC GATCGCCGGT TGCGATCCGC GAGCCGCCGC CCGCACGATT
CACGACGACG GCATCGACGT GCTCGTCGAC CTCGCCGGCC ATACGCAGGC GAGCGGCCTG
GCCGCATTCG GCTGGAAGCC GGCGCCCGTG CAGGCGAGCT GGCTCGGCTT CTTCGCATCG
ACGGGCTGCG ACGCGATCGA CTATTTCATC GGCGACGCGC GGACGTTGCC GGCCGACGAG
GCGCATCACT TCGTCGAGCA ACCGTGGCAT TTGCCGGACA GCTACCTGTG CTTCACGCCG
CCGTCCGACG ACGTCGCAGT CGGCCCGCTG CCGATGGCCG CGAACGGCCA CGTCACGTTC
GGCTGTTTCG GCAAGCTCGT GAAGCTCGGT GACGACGTCG TGCGCGTGTG GTCGCGCGTG
CTGGATGCGC TGCCCGGTGC ACGGCTGTTG CTGAAGGCGC GCGAGCTTGA ACAGGCGGCG
GTGCGCGACG CGACCGCCGC GCGCTTCGCG CGGCACGGGA TCGACGCGAG CCGGCTGCTG
TTCGACGGCG CATCGCCGCG CGCGGAGTAT TTCAACGCGT ACAACCGGAT CGATGTCGCG
CTGAGCCCGT TCCCGTACCC GGGCGGCACG ACGACGGCCG AAGCGCTGTG GATGGGCGTG
CCGGTGCTCG GGATGAAGGG CGGACGGTTC GTCACGCACA TCTGCGAGAG CCTGCTGCAC
GCGGCCGGGA TGCCCGACTG GATCGCCGGC GATGAGGACG ACTATGTCGC GAAGGCGGTC
GCCGCCGCGC AGGGCGGCGC GCGGCTGGCG GCGTTGCGCG CGACGCTGCG CGAACGCACG
CTCGCGTCGC CGCTGTGCGA TGCGGCACGC TTCGCACGCA ATCTCGAAGA TGCCTTCGCC
GGCATGTGGA CACGCTATAC GGAAACGGCA CAGACAGCAT GA
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| Protein sequence | MEPIELQLRA ALAHHEAGRL GEAKALYDAI LHAEPGQPDA MHFLGLLACQ LKQYDAGLAL
MERSLAARPD ASYFNNLGNM LRECGRLDDA IAHYRRAVAL RPDYPEAHNN LGNALRDARD
PAEAMQSCSR AIELRPGYAE AYNNLGNVLQ DLGELDAAAA SYGKAIAFHP AYAEAHSNLG
NVLRTQERHA DAIVHYRRAI ELSPALPAAC HGLGLSLWAL GELSEAVSVL GAAAAGSDDA
SLHNNYAGVL RDAGDLDAAA AHYARAIALD ASLAAAHANL SGVRRRQARY AQALVHAQEA
IRIAPHLADA HNQAGNAHHG LGDLVAAQAC YRTALELNPA DSGTCHNLSV VLLKRERHAD
ALAYCRQALA GGRPTVSMYV NLGDILRAQG NVDAAVPAYR DALALVRDDA SDDAAEVLGR
LLFAAAASAT VSPADYLNDA RRYGRHLAAR STRYTHDVRA RAADALHRPL RVGFVSGDLR
QHPVGIFVES VFAHLDRTRV APYVYTTSDE ADAITARLKP HAAVWRSIAG CDPRAAARTI
HDDGIDVLVD LAGHTQASGL AAFGWKPAPV QASWLGFFAS TGCDAIDYFI GDARTLPADE
AHHFVEQPWH LPDSYLCFTP PSDDVAVGPL PMAANGHVTF GCFGKLVKLG DDVVRVWSRV
LDALPGARLL LKARELEQAA VRDATAARFA RHGIDASRLL FDGASPRAEY FNAYNRIDVA
LSPFPYPGGT TTAEALWMGV PVLGMKGGRF VTHICESLLH AAGMPDWIAG DEDDYVAKAV
AAAQGGARLA ALRATLRERT LASPLCDAAR FARNLEDAFA GMWTRYTETA QTA
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