| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0050 |
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| Symbol | |
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| ID | 4308718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 57996 |
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| End bp | 59213 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638147828 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_771945 |
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| Protein GI | 115350106 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.899692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCAT TCCGTTTCGA AGCCATCGAT TCGGCGGGGC GACCGCAGAA AGGCGTGATC
GATGCCGACA GTGCGCGCGG CGCGCGCGGC CAGCTGCGCA CGCAGGGGCT CACGCCGCTC
GTCGTCGAGC CGGCCGCCAG TGCGACCCGC GGCGCGCGTT CGCAGCGCCT CGCGTTCGGC
CGCAAGCTGT CGCAGCGCGA ACAGGCGATC CTCACGCGCC AGCTCGCGAG CCTGCTGATC
GCGGGGCTGC CGCTCGACGA GGCGCTCGGC GTGCTGACCG AGCAGGCCGA ACGCGACTAC
ATCCGCGAGC TGATGGCCGC GATCCGTGCA GAAGTGCTCG GCGGCCATTC GCTCGCGAAT
GCGCTGGGCC AGCATCCGCG CGACTTCCCG GAAATCTACC GCGCGCTCGT CGCGGCGGGC
GAGCACACCG GCAAGCTCGG CATCGTGCTG TCGCGCCTCG CCGACTACAT CGAACAGAGC
AACGCGCTGA AGCAGAAGAT CCTGCTGGCG TTCACGTATC CGGGGATCGT CACGCTGATC
GCATTCGGCA TCGTCACGTT CCTGCTGAGC TATGTCGTGC CGCAGGTCGT CAACGTGTTC
GCGAGCACGA AGCAGCAACT GCCCATTCTC ACGGTCGTGA TGATGGCGCT GTCGGAGTTC
GTGCGGCACT GGTGGTGGGC GATCCTGATC ACGGTCGCGC TCGTCGTGTG GTTCGTGAAG
GCGACACTGT CGCGCGACGG GCCGCGGCTC GCGTTCGACC GCTGGGTGCT GACCGCGCCG
CTCGCGGGCA AGCTCGTGCG CGGCTACAAC ACGGTGCGCT TCGCAAGCAC GCTCGGGATC
CTGACCGCGG CCGGCGTGCC GATCCTGCGC GCGTTGCAGG CGGCCGGCGA GACGCTGTCG
AACCGCGCGA TGCGCGCGAA CATCGACGAT GCGATCGTGC GCGTGCGCGA AGGCTCCGCG
CTGTCGCGCG CGCTGAACAA CGTGAAGACA TTCCCGCCGG TGCTCGTGCA CCTAATCCGT
TCCGGCGAAG CGACGGGCGA CGTGACGACG ATGCTCGACC GCGCGGCGGA AGGCGAGGCG
CGCGAGCTCG AGCGGCGCAC GATGTTCCTG ACGAGCCTGC TCGAGCCGCT GCTGATCCTC
GCGATGGGCG GCATCGTGCT CGTGATCGTG CTGGCCGTGA TGCTGCCGAT CATCGAGCTG
AACAACATGG TGCAGTGA
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| Protein sequence | MPAFRFEAID SAGRPQKGVI DADSARGARG QLRTQGLTPL VVEPAASATR GARSQRLAFG
RKLSQREQAI LTRQLASLLI AGLPLDEALG VLTEQAERDY IRELMAAIRA EVLGGHSLAN
ALGQHPRDFP EIYRALVAAG EHTGKLGIVL SRLADYIEQS NALKQKILLA FTYPGIVTLI
AFGIVTFLLS YVVPQVVNVF ASTKQQLPIL TVVMMALSEF VRHWWWAILI TVALVVWFVK
ATLSRDGPRL AFDRWVLTAP LAGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAAGETLS
NRAMRANIDD AIVRVREGSA LSRALNNVKT FPPVLVHLIR SGEATGDVTT MLDRAAEGEA
RELERRTMFL TSLLEPLLIL AMGGIVLVIV LAVMLPIIEL NNMVQ
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