Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0026 |
Symbol | |
ID | 4309653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 38695 |
End bp | 39699 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638147804 |
Product | ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein |
Protein accession | YP_771921 |
Protein GI | 115350082 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACCCA TCCTGCGCAC CCTCGCCGTT GCGGCCAGCC TGAGCTGCGC GCTCGCCGCT CACCCCGCAC TTGCCGAAGA CGGCGGCAAG ATCACGATCA TGGTCGGCGG GATCGCGAAG CTGATCTACC TGCCCGCGCG GCTCACGCAG GAGCTCGGCA ACTTCAAGGC CGAAGGGCTC GACGTCGAAC TGCTGTCGCA GCCGGCCGGC GTCGACGCCG AGAACGAGTT GCTGGCGGGC GCCGTGCAAG GCGTCGTCGG CTTCTACGAC CATACGGTCG ACCTGCAGAG CAAGGGCAAG GACGTGAAGG CGATCGCCGT GTTCTGCCAG GTGCCGGGCG AAGTCGAGAT GGTGTCGACC AAGGCCGCGC CCACCTTCAA GTCGATGGCC GACGCGAAGG GCAAGACGCT CGGCGTGACG GGCCTCGGCT CGTCGACCAG CTTCCTCACG CAATACCTGG CACTGCAGCG CGGCGTGCCG TCGACGCAGT ACACGATGCT GCCGGTCGGC GCCGACGCGA GCTTCATCGC CGCGATCAAG CAGGGCCGGA TCGACGCCGG GATGACGACC GAGCCGACCG TGTCCGCGCT CGAGAAGATG GGCGACGCGA AGGTGCTGGT CGACATGCGC ACCCTCGAAG GCACGCGCGC CGCGCTCGGC GGCACCTACC CGGCCGCGAG CCTGTACGTG CAGTCGGCCT GGGCCGATTC GCACAAGGCG GAAGCCACCA AGCTCGCGCA CGCGTTCGCG AAGACGATGC AGTTCATCCA CACGCACAGC GCCGAGGAAA TCGCCGCGAA GATGCCGGCC GACTACCAGA AGGACAAGGG CCTGTACGTG TCCGCGCTGA AGGCGTCGCT GCCGATGTAC ACCGCCGACG CGAAGATGCC GGCCGACGGC CCGGCGACCG TGCTGAAGGT GCTGTCGGCG TTCAACCCGT CGGTGAAGGG CAAGCACATC GACCTGGCGC GCACCTACAC CAACGATTTC GTCAACGCGA AGTAA
|
Protein sequence | MRPILRTLAV AASLSCALAA HPALAEDGGK ITIMVGGIAK LIYLPARLTQ ELGNFKAEGL DVELLSQPAG VDAENELLAG AVQGVVGFYD HTVDLQSKGK DVKAIAVFCQ VPGEVEMVST KAAPTFKSMA DAKGKTLGVT GLGSSTSFLT QYLALQRGVP STQYTMLPVG ADASFIAAIK QGRIDAGMTT EPTVSALEKM GDAKVLVDMR TLEGTRAALG GTYPAASLYV QSAWADSHKA EATKLAHAFA KTMQFIHTHS AEEIAAKMPA DYQKDKGLYV SALKASLPMY TADAKMPADG PATVLKVLSA FNPSVKGKHI DLARTYTNDF VNAK
|
| |