Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0021 |
Symbol | |
ID | 4309648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 33326 |
End bp | 34555 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638147799 |
Product | outer membrane protein (porin)-like protein |
Protein accession | YP_771916 |
Protein GI | 115350077 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATGCG TCGGCCTCTC GCTGTGGTCG GCGACATTCG GCATACATTA CGTACTGCCA ACGAACAGAT TTCAATGCGG CAGCTCGGAG GAGACGATCT TGAAACGAAA AACCCTTGCC CTTTCCATCG CGGCGGCTGG CCTGTGCGCC GGCACCCACG CGCATGCGCA ATCGAGCGTG CAACTCTACG GGCTGATGGA CCTGAGCTTT CCGACCTACC GGACCCACGC CGACGCGAAC GGCAAACATG TGATCGGAAT GGGCAACGAA GGCGAGCCGT GGTTCAGCGG CAGCCGCTGG GGCCTCAGAG GCGCTGAAGA CATCGGCGGC GGCACGAAGA TCATCTTCCG CCTCGAAAGC GAATTCGTGG TCGCCAACGG CCAGATGGAA GACGAAGGCC AGATCTTCGA CCGCGACGCC TGGGTCGGCG TCGAGGACGA ACGTTTCGGC AAGCTGACGG CCGGCTTCCA GAATACGATC GCGCGCGACT CAGCGGCGAT CTACGGCGAC GCATACGGCT CCGCGAAGCT GACCACCGAG GAAGGCGGCT GGACCAACTC GAACAACTTC AAGCAGATGA TCTTCTACGC GGCCGGCCCG ACCGGCACGC GCTACAACAA CGGCCTCGCG TGGAAGAAGC TGTTCAGCAA CGGCATCTTC GCGAGCGCCG GCTATCAGTT CAGCAACTCG ACCGCGTTCG CGACGGGTTC CGCCTACCAG CTCGCGCTCG GTTACAACGG CGGGCCGTTC AACGTGTCGG GCTTCTATAA CCACGTGAAC CACAACGGCT TCAGGAACCA GACGTTCTCG GTCGGCGGCA ACTATACGTT CAGCATCGTG CGCCTGAACG CCGGCTACTT CCGCTACAAC GGCGACCAGG GCTCGCTCGG CCAGCGTCAC GACGATTCGT GGACCGTGTC GGTGAAAGTC GCGCCGAAGG GCGCGCTCGA CTACGAGCTC GGCTACCAGC AGATGCGGGT CAAGAACGCC GCGAACAACG CCGACGGCTT CACGCCGAAC GCGAACCTCG GCACGTTCAG CCTGACCAAC GGTGTCGGCA ACGGCTTCAA GGAGACGATC TACGGGTCGG TGTTCTACCA CCTGAGCAAG CGCACCGAGG TGTACCTGGC CGGCGACTAC ATGCGCCTGC ACGGCGGCTA CACGGTGGCG TCGACGTTCG GCGCGCAAAA CCAGCTCGAA CTCACGTCGG GCATCCGCAC GCGCTTCTGA
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Protein sequence | MLCVGLSLWS ATFGIHYVLP TNRFQCGSSE ETILKRKTLA LSIAAAGLCA GTHAHAQSSV QLYGLMDLSF PTYRTHADAN GKHVIGMGNE GEPWFSGSRW GLRGAEDIGG GTKIIFRLES EFVVANGQME DEGQIFDRDA WVGVEDERFG KLTAGFQNTI ARDSAAIYGD AYGSAKLTTE EGGWTNSNNF KQMIFYAAGP TGTRYNNGLA WKKLFSNGIF ASAGYQFSNS TAFATGSAYQ LALGYNGGPF NVSGFYNHVN HNGFRNQTFS VGGNYTFSIV RLNAGYFRYN GDQGSLGQRH DDSWTVSVKV APKGALDYEL GYQQMRVKNA ANNADGFTPN ANLGTFSLTN GVGNGFKETI YGSVFYHLSK RTEVYLAGDY MRLHGGYTVA STFGAQNQLE LTSGIRTRF
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