| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0007 |
|---|
| Symbol | |
|---|
| ID | 4309443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 17558 |
|---|
| End bp | 18649 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638147784 |
|---|
| Product | catalase domain-containing protein |
|---|
| Protein accession | YP_771902 |
|---|
| Protein GI | 115350063 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00847124 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT CTTCCTCTTC TTCGCCGCCG CGCGAGCCCG GGCGCGGGTG GTGGCGCTGG
GCCGTGATTG GCGGCGCGGT GGCCGGCGTG ACCGTGGCGT TCGGGTATGT CGGCGGCTGG
CTCGCGCCGA CGCGGCTGAC CCCGCACCGA ATCGTCGACG CGCTGCAGAC GGCCGGCGGC
GGCGCGCATC CGGGTTTCCG GCGCAATCAC GCGAAGGGCG TGTGCGTGAC CGGTTACTTC
GAAAGCAACG GGGCCGCGAG CGCGTATTCG GTCGCGCCGT TCTTCAAGGC GGTGCGCACG
CCGGTGGTCG GGCGGTTCGC GCTGCCGGGC GGGAATCCGT ATGCGCCTGA CAGCAGCGTG
CCGATCCGTA GCCTCGCGCT GAAACTCACC GCACCGGACG GCCAGCAATG GCGGACCGGG
ATGAACGCGA TGCCCGTGTT TCCGGTAGCC ACGCCGAAGG CGTTCTACGC GCAGTTGCTC
GCGACCCGCC CGGATCCGGC CACGGGCAAA CCCGATCCGG CGAAGGTGAA GGCGTTTTTC
GGCGCGCATC CGGAGACGGC TGCATTCCGC GAGTGGGTGA AGGGTGCGAA GCCGAGCGCG
AGCTACGTCA CCGAAAGTTA TTACGGGCTG AACGCGTTCT ACTTCGTGGA CGCAGCGGGC
AAGCGCCAGG CGGTGCGGTG GCGCGTCGTG CCGGAGCAGA CGGCCGGCGC CGGCGACGTC
GCGACGGCCG CGGATCCGAA CGTGTTGCAG CAGGACCTGA CGCATCGCAT CGCGGACGGT
GCGCAGAAGT GGAAGCTGCT GGTCACGCTG GCGGCGCCCG GCGATCCGGT GGACGACGCG
ACGAAGGTCT GGCCCGCGCA GCGCACGACG ATCGACGCGG GCACGCTCGT GCTCGACCGC
GTGGAGCCGC AGGACAGCGG GCCGTGCCGC GATGTGAATT ACGACCCGAC GGTGTTGCCG
CAGGGGATTC AGGTGTCGGG GGATCCGTTG CTGGCGGCGC GGTCGGCGGC TTATGCGGAT
TCGTATCTGC GCAGGACGAG TGAAGAGGCC GGCGTGGCCG GCGCGGCGCG GTTGAGTGCG
GAGGGACGGT GA
|
|---|
| Protein sequence | MKQSSSSSPP REPGRGWWRW AVIGGAVAGV TVAFGYVGGW LAPTRLTPHR IVDALQTAGG
GAHPGFRRNH AKGVCVTGYF ESNGAASAYS VAPFFKAVRT PVVGRFALPG GNPYAPDSSV
PIRSLALKLT APDGQQWRTG MNAMPVFPVA TPKAFYAQLL ATRPDPATGK PDPAKVKAFF
GAHPETAAFR EWVKGAKPSA SYVTESYYGL NAFYFVDAAG KRQAVRWRVV PEQTAGAGDV
ATAADPNVLQ QDLTHRIADG AQKWKLLVTL AAPGDPVDDA TKVWPAQRTT IDAGTLVLDR
VEPQDSGPCR DVNYDPTVLP QGIQVSGDPL LAARSAAYAD SYLRRTSEEA GVAGAARLSA
EGR
|
|---|
| |