| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0003 |
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| Symbol | gyrB |
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| ID | 4309439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3262 |
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| End bp | 5736 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638147777 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_771898 |
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| Protein GI | 115350059 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.147322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC AGCACAATTC GCAACCCGAT AACAGCAGCT ACGGCGCTTC GTCGATCCAG
ATCCTCGAAG GTCTGGAAGC GGTGCGCAAG CGCCCCGGGA TGTACATCGG CGACACGTCG
GATGGCACCG GTCTGCACCA CCTCGTGTTC GAGGTGCTCG ACAACTCGAT CGACGAAGCG
CTGGCCGGGT ACTGCAACGA CATCCACGTG ACGATTCACG CCGACAACTC GATTTCGGTG
ACCGACAACG GCCGCGGGAT TCCGACCGAC GTGAAGATGA ACGACAAGCA CGAGCCGAAG
CGCAGCGCCG CCGAGATCGT GATGACCGAG CTGCACGCCG GCGGCAAGTT CGACCAGAAC
AGCTACAAGG TGTCCGGCGG CCTGCACGGC GTGGGCGTGT CGTGCGTGAA CGCGCTCTCG
AGCTGGCTGC GCCTCACCGT GCGCCGCAAC GGCAAGAAGC ATTTCATGGA GTTCCATCGC
GGCGTCGCGC AGGAGCGCGT GCTCGAGAAG GTGGACGGCG TGGAAGTGTC GCCGATGCTG
GTGACCGGCG ACACCGAGAA CCGCGGCACC GAAGTGCACT TCATGGCCGA TCCGACGATC
TTCGGCACCG TTGAATATCA CTACGACATC CTCGCGAAGC GGATGCGCGA GCTCTCGTTC
CTGAACAACG GCGTGCGGAT CCGCCTGACC GACCTGCGTT CGGGCAAGGA AGACGATTTC
GCGTTCGCCG GCGGTGTGAA GGGCTTCGTC GAGTACATCA ACAAGACGAA GACCAACCTG
CACCCGACCA TTTTCCACGC CAACGGCGAG AAGGATGGCG TGGGCGTCGA AGTTGCGATG
CAGTGGAACG ACAGCTACAA CGAGAACGTG CTGTGCTTCA CGAACAACAT TCCGCAGCGC
GACGGCGGCA CGCACCTGAC CGGCCTGCGG GCCGCGATGA CGCGCGTCAT CAACAAGTAC
ATCACCGATA ACGAAATCGC GAAGAAGGCG AAGGTCGAGA CGACCGGCGA CGACATGCGC
GAAGGGTTGT CGTGCGTGCT GTCGGTGAAG GTGCCGGAGC CGAAGTTCAG CTCGCAGACG
AAGGACAAGC TGGTGTCGTC CGAAGTGCGG GCGCCGGTTG AAGAAGTCGT TGCGAAGGCG
CTGGAAGAGT TCCTGCTCGA AACGCCGCTC GACGCGAAGA TCATCTGCGG GAAGATCGTC
GAAGCTGCGC GTGCGCGCGA TGCCGCGCGC AAGGCGCGCG AAATGACGCG CCGCAAGGGC
GTGCTCGACG GCGTCGGCCT GCCGGGCAAG CTCGCGGACT GCCAGGAGAA AGATCCGGCG
AAGTGCGAAA TCTACATCGT CGAGGGCGAC TCGGCAGGTG GGTCGGCGAA GCAAGGGCGT
GACCGGAAGT TCCAGGCCAT CCTGCCGCTG CGCGGCAAGG TGCTGAACGT CGAGAAGGCG
CGCTACGACA AGCTGCTGTC GTCGGAGCAG ATCGTCACGC TCGTGACCGC GCTGGGCTGC
GGCATCGGCA AGGACGATTA CAACCTCGAC AAGCTGCGCT ATCACCGCAT CATCATCATG
ACCGACGCGG ACGTCGACGG TGCGCACATC CGGACGCTGC TGCTCACGTT CCTCTATCGC
CAGATGCCGG ACATGATCGA GCGCGGGTAT GTGTATATCG CGCAGCCGCC GCTTTACAAG
ATCAAGGCGG GCAAGGACGA GCGGTATCTG AAGGACGATA CGGAGCTGAA CGCGCATATG
CTGCGGTTGG CGCTTCAAGG GTCGGAGCTG GTGCCTGGCG AGAACGCAGC GGCGATTTCG
GGCGATGCGC TCGGGGAGCT GGCGCGGTCG TACCTGCTGT CGAAGAGCGT GATCGAGCGG
TTGAGCCGGT TGTATGATCC GGCCGCGCTG GAAGCGGTCA TGGATGGGGT GGCGATCGAT
CTCTCCAATG AGGCTTCGAC GGAGGCTTCG GCTAAGGCGC TGCATGCCGC GTTGCATGAT
GACGCGCTCA AGAACGACGT GCGTGTTGTG CCTTCGTATG ACCCGGTGCG TGAGCAACGG
TCGCTGCATG TCGAGCGGAC GCATCACGGG AATGTGCGGG TTTCGGTCAT CGACCAGGAA
TTCCAGCACA CGGCGGATTA TCAGCAGCTT GTGACCACCG CGGATACGTT CAAGGGGCTT
ATTGGGGAAG GTGCGGTCAT CAAGCGCGGT GAGCGCAGTA TGGCTGTGTC GGACTTCAAG
AGCGCGATGA AGTGGCTGCT TGCCGATGCC GAGCGGAATG TTTCGAAGCA GCGGTATAAG
GGGCTCGGGG AGATGAACCC CGGGCAGCTG TGGGAAACGA CGATGGATCC GGCTGTGCGA
AGACTGCTGC GGGTGCAGAT CGAGGATGCT ATTGCTGCGG ATGGGATCTT TACTACGCTG
ATGGGGGATG AGGTCGAGCC GCGGCGGGCG TTTATCGAGA GCAATGCGTT GCGGGCGGGG
AATATTGACG TTTGA
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| Protein sequence | MSEQHNSQPD NSSYGASSIQ ILEGLEAVRK RPGMYIGDTS DGTGLHHLVF EVLDNSIDEA
LAGYCNDIHV TIHADNSISV TDNGRGIPTD VKMNDKHEPK RSAAEIVMTE LHAGGKFDQN
SYKVSGGLHG VGVSCVNALS SWLRLTVRRN GKKHFMEFHR GVAQERVLEK VDGVEVSPML
VTGDTENRGT EVHFMADPTI FGTVEYHYDI LAKRMRELSF LNNGVRIRLT DLRSGKEDDF
AFAGGVKGFV EYINKTKTNL HPTIFHANGE KDGVGVEVAM QWNDSYNENV LCFTNNIPQR
DGGTHLTGLR AAMTRVINKY ITDNEIAKKA KVETTGDDMR EGLSCVLSVK VPEPKFSSQT
KDKLVSSEVR APVEEVVAKA LEEFLLETPL DAKIICGKIV EAARARDAAR KAREMTRRKG
VLDGVGLPGK LADCQEKDPA KCEIYIVEGD SAGGSAKQGR DRKFQAILPL RGKVLNVEKA
RYDKLLSSEQ IVTLVTALGC GIGKDDYNLD KLRYHRIIIM TDADVDGAHI RTLLLTFLYR
QMPDMIERGY VYIAQPPLYK IKAGKDERYL KDDTELNAHM LRLALQGSEL VPGENAAAIS
GDALGELARS YLLSKSVIER LSRLYDPAAL EAVMDGVAID LSNEASTEAS AKALHAALHD
DALKNDVRVV PSYDPVREQR SLHVERTHHG NVRVSVIDQE FQHTADYQQL VTTADTFKGL
IGEGAVIKRG ERSMAVSDFK SAMKWLLADA ERNVSKQRYK GLGEMNPGQL WETTMDPAVR
RLLRVQIEDA IAADGIFTTL MGDEVEPRRA FIESNALRAG NIDV
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