| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0001 |
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| Symbol | dnaA |
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| ID | 4311769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 203 |
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| End bp | 1780 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638147775 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_771896 |
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| Protein GI | 115350057 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.375862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATT TCTGGCAACA CTGTTCCGCA CTGCTGGAGC GCGAGCTGAC GCCCCAGCAG
TACGTGACGT GGATCAAACC CTTGGCCCCG GTGGCCTTCG ATGCGTCGGC GAACACGCTG
TCCATCGCCG CGCCGAACCG CTTCAAGCTG GACTGGGTCA AGAGCCAGTT TTCGGGCCGG
ATCTCCGATC TGGCCCGCGA TTTCTGGAAT GCGCCGATCG AAGTCCAGTT CGTCCTCGAT
CCGAAAGCCG GCATGCGCAG CGCCGCCGCG CACGCCGCGC CGGCCGCCCA GCGCGCGCCG
CTGACACCGA ATGGCCCCGC CGCGACGGTC GCCGCGATCG CCGCCAATCT GGCCGCGAAT
GCCGGTGCCG CGCCCAGCGC GCCGGCCGAC GTGCCGATGA CGGCGTCGGC GGCCGCCGCG
CACCACCTGA ACGCCGATGA CGCCGACATC GACCTGCCGA GCCTGCCCGC GCACGAAGCG
GCCGCCGGGC GCCGCACGTG GCGTCCGGGC CCCGGCGCCG CGCCCGCGAA CGGCGGTGAA
GCCGATTCGA TGTACGAACG TTCGAAGCTG AACCCGGTGC TCACGTTCGA CAACTTCGTG
ACCGGTAAGG CGAACCAGCT CGCACGCGCC GCCGCGATCC AGGTCGCCGA TAACCCCGGC
ATCTCGTACA ACCCGCTGTT CCTGTACGGC GGCGTCGGCC TCGGCAAGAC CCACCTGATC
CACGCGATCG GCAATCAGCT GCTGCTCGAC AAGGCCGGTG CGCGGATCCG CTACATCCAC
GCCGAGCAAT ACGTGTCCGA CGTGGTGAAG GCATACCAGC GCAAGGCGTT CGACGACTTC
AAGCGCTACT ACCACTCGCT CGACCTGCTG CTGATCGACG ATATTCAGTT CTTCTCCGGC
AAGTCGCGCA CGCAAGAGGA ATTCTTCTAC GCGTTCGAGG CGCTCGTCGC GAACAAGGCG
CAGGTGATCA TCACCAGCGA CACGTATCCG AAGGAGATCT CGGGCATCGA CGATCGCCTG
ATCTCGCGCT TCGACTCGGG CCTCACCGTC GCGATCGAGC CGCCCGAGCT CGAAATGCGC
GTCGCGATCC TGATGCGCAA GGCGCAGTCG GAAGGCGTGA ACCTGTCGGA AGACGTCGCG
TTCTTCGTCG CGAAGCACCT GCGCTCGAAC GTGCGCGAAC TCGAAGGCGC GCTGCGCAAG
ATCCTCGCGT ATTCGAAGTT CCACGGCCGC GAGATCTCGA TCGAGCTGAC CAAGGAAGCG
CTGAAGGACC TGCTGACCGT GCAGAACCGG CAGATTTCGG TCGAGAACAT CCAGAAGACC
GTCGCCGACT TCTACAACAT CAAGGTCGCC GACATGTATT CGAAGAAGCG TCCCGCGAAC
ATCGCGCGGC CGCGGCAGAT CGCGATGTAC CTGGCGAAGG AACTCACGCA GAAGAGCCTG
CCCGAGATCG GCGAGCTGTT CGGCGGGCGC GACCACACCA CCGTGCTGCA CGCCGTGCGC
AAGATCGCCG ACGAGCGCAG CAAGGATGCG CAGCTCAACC ACGAGCTGCA CGTGCTGGAA
CAGACGCTGA AGGGCTGA
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| Protein sequence | MNDFWQHCSA LLERELTPQQ YVTWIKPLAP VAFDASANTL SIAAPNRFKL DWVKSQFSGR
ISDLARDFWN APIEVQFVLD PKAGMRSAAA HAAPAAQRAP LTPNGPAATV AAIAANLAAN
AGAAPSAPAD VPMTASAAAA HHLNADDADI DLPSLPAHEA AAGRRTWRPG PGAAPANGGE
ADSMYERSKL NPVLTFDNFV TGKANQLARA AAIQVADNPG ISYNPLFLYG GVGLGKTHLI
HAIGNQLLLD KAGARIRYIH AEQYVSDVVK AYQRKAFDDF KRYYHSLDLL LIDDIQFFSG
KSRTQEEFFY AFEALVANKA QVIITSDTYP KEISGIDDRL ISRFDSGLTV AIEPPELEMR
VAILMRKAQS EGVNLSEDVA FFVAKHLRSN VRELEGALRK ILAYSKFHGR EISIELTKEA
LKDLLTVQNR QISVENIQKT VADFYNIKVA DMYSKKRPAN IARPRQIAMY LAKELTQKSL
PEIGELFGGR DHTTVLHAVR KIADERSKDA QLNHELHVLE QTLKG
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