Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6687 |
Symbol | |
ID | 6181594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | - |
Start bp | 191342 |
End bp | 192406 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641685435 |
Product | ImpA domain-containing protein |
Protein accession | YP_001812340 |
Protein GI | 172064690 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.895171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGA ATACGCCCGG CGCGGTGCTG CGCTACGCGG ATCTCCTCGA ACCTGTTTCG GACGATGTGC CGTGCGGCCC CGATCTCGAA TACGATCCGG CCTTCGTGAT GCTGCAGGCA GCCGTCGCGC CCAGAACGGA CGCGCAATAC GGCGATTTCG TCGACGCGCC GCAACCGGCG AACTGGGCCG AAGCCGAGCG CGCCTGCCGC GCGCTGATGC TACGCACGAA GGACATCCGG CTGCTTACGA TCCTGATCCG CTGCCGCATC CGCCAAAGCG GCGCCGAAGG TCTGCGCGAC GGTGTCATTT TATTGCGGCG GATGCTCGAC CGCTACGGCG AGGCATTGCA TCCGACTCCG GTTATCGACG GCGAGCGCGA TCCGATCGTC TACTCAAACG CGATTGCCGC CCTCGCCGAC GCCGATGCGA CGCTCGGGGA CGCCCGCGAC ATCCCGCTGC CGAAAACTGC CGGCCTGCAG TTGCAGTTGC GCGACATCGA GAAAGCGTTC GCCGTCCCGC GCGCCAAGGA TGCGCTCGCG CCGGAATCGG CGACGCGACT GCTCGGCGAA CTGTGGAATC GGCGCGACCC AACGATCATC GCGCTGGCGG AGGCGCAGCA TGCCGTCGCC GAAATTTCCG CGCGAACGCG TGACGCTTTG CAGGCCGACG CACCGGACCT CGACGGCATC ACGAAACTGC TGCAGCCGTT CGCGCAGACG TCCGCCGAAG CGGGCCGCGC ACCGGCCACC TCCCGTCCGC TCGACGCACC GTCGGATCCG GCATCGGCGC CGGATGCGGG CGCGGCCTCC GTCCCGCTCG CCGACACGGA AATGCACGAG GCCGATGCCC CGGCGCTGAC AGCGCCCGCC GGGCGGCCGA CGGATCGCTG GAGCGCGCTC GCGGCGATTC AGGAGACGCG CCTTTGGTTC GAGCAAAACG AGCCGAGCAG CCCCGTCATC GTGCTGCTCC GGCAGTCCGA ACGCATGGTT GGCAAGCGCT TTTCCGAGCT TGCGCAGGTG ATTCCCGCCG AGCTTCTCGC GCAATGGGAC GCGATTGACG TCTAA
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Protein sequence | MNANTPGAVL RYADLLEPVS DDVPCGPDLE YDPAFVMLQA AVAPRTDAQY GDFVDAPQPA NWAEAERACR ALMLRTKDIR LLTILIRCRI RQSGAEGLRD GVILLRRMLD RYGEALHPTP VIDGERDPIV YSNAIAALAD ADATLGDARD IPLPKTAGLQ LQLRDIEKAF AVPRAKDALA PESATRLLGE LWNRRDPTII ALAEAQHAVA EISARTRDAL QADAPDLDGI TKLLQPFAQT SAEAGRAPAT SRPLDAPSDP ASAPDAGAAS VPLADTEMHE ADAPALTAPA GRPTDRWSAL AAIQETRLWF EQNEPSSPVI VLLRQSERMV GKRFSELAQV IPAELLAQWD AIDV
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