| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6659 |
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| Symbol | |
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| ID | 6181704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 158173 |
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| End bp | 158796 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641685411 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001812316 |
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| Protein GI | 172064666 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000389797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000384101 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGATGG AGTGTATCGC AGGCACTACA AATGCGATCG ATCTAATTAG CGTGTGTGGG
AGCGCGAATG ATTTGTTCGC GTTATTGGCG ACAACCCGTT GCGATGTTGC GCTGATCGAT
TTCGCGATGC ACGGCGCCGG GCAGATGGAA GGGCTAGCGC TACTCGGATA TTTGAGGCGG
ACCTATCCGG ACGTTTCCGT CGCTGTGCTG CTCTCCAATG AAAATCCGGT GATCGTCCAT
TCGATCCTGG AGAGGGGGGT GGCGAGTGTC GTCAGTGAGT TTGATGACGT TGGCCATATC
GTCACGGCAA TTCATACGTG CTACGGCGGT GGGAATTATC TGTCGCCGCT GATCAAGCGC
TCGCTCGAAT TAGCAAAGGG CGAGGCGACC AACCGGGTGC CGAAGCTGTC ACCGCGCGAG
ATAGAGGTGA TCCGCCTATA CCTGTCGGGC CTTTCAATTA ATGCGATCGC TGGCCGGCTG
AATAAAGGAA AACAGACAGT CAGCGCACAG AAGATGAGCG CGATGAAGAA GCTGGGCGTG
AAGAGCGACG TCGAGCTAAT CCGATGTGCG ACTTGTCTTG ATTTGATTGG CAATCCCCCC
GTTTTCCACG GGGTTCAGAA GTAG
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| Protein sequence | MGMECIAGTT NAIDLISVCG SANDLFALLA TTRCDVALID FAMHGAGQME GLALLGYLRR
TYPDVSVAVL LSNENPVIVH SILERGVASV VSEFDDVGHI VTAIHTCYGG GNYLSPLIKR
SLELAKGEAT NRVPKLSPRE IEVIRLYLSG LSINAIAGRL NKGKQTVSAQ KMSAMKKLGV
KSDVELIRCA TCLDLIGNPP VFHGVQK
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