| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6641 |
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| Symbol | |
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| ID | 6181788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 135703 |
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| End bp | 136860 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641685401 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001812306 |
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| Protein GI | 172064656 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000123291 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACAAA TGGGACGGCC GGGGTTGTCG CCAGAAGGCA AGTCCGAGGT TTGGCGGCGG
TGGCGGGCAG GTGAATCGTT TCTTGGCATC GGGAAGGCGC TAGGCAAGCC TGCAGGCTCG
ATCTACGGCG TGATCCGACT ATGCGGAGGG TACACCCCTG CTGCTCGTAA GCGGTCGTTG
CGGGCATTAA CCTTGAGTGA ACGTGAAGAG ATCTCGCGTG GCGTCTCGGC TGGACTTTCA
ATTCGAGCGA TTGCCCGCCA GTTGAACCGC GCGCCTTCCA CGATTTCCCG TGAGATTGCG
CGTAACGGCG GAACGGGCCA CTATCGAGCT CTGGAAGCGG ATGAGCGAGC CTTGCAGGCT
GCTCTGCGAC CCAAACGCTG CCTTCTGGAG CAGAACCGGC GCTTGCGCTA TGCGGTCGAG
CGTAAGCTTT GCCGCGAATG GTCTCCAGAG CAAGTGAGCG GTTGGCTTAA GAACCGATAT
GCCGATGACG AGGCAATGCG CGTGTCTCAC GAGACGATAT ATCGCAGCCT GTTTGTGCAA
GCGCGCGGCG TTCTGAAGAA GGAACTGCAG TATCACTTGC GGACCCAGCG GAAGATGCGT
CACTCACGCT CGTCCAGCAC GAAGGGCGCT CGCAATAAGA TTGCTGACGC GGTTTTGATT
CACGAGCGAC CGCGTGAAGC AGCCGACCGT GCGGTGCCGG GTCACTGGGA AGGAGATCTC
GTCAGTGGCG CCAACAATAC TCATGTCGCC ACTTTGGTCG AGCGACGCTC GAGGTTCACC
ATCATCGTCA AGGTAAAGGG AAAAGACACG GTGAGCGTTG TGGCGGGCCT GAAGCGCGAG
GTTAAGCGGT TGCCGCAGCA TCTACGCAAG TCGCTCACCT GGGACCGCGG CATGGAGCTG
GCGAACCACA AAGACTTCAC GATCGCGACG GACGTGAAGG TCTACTTCTG CGACCCGCGA
AGTCCTTGGC AACGTGGTAC CAACGAAAAC ACGAACCGAC TCCTGCGTCA GTACTTGCCC
CACGGTACGC AACTTGATCA ATACTCGCAG GCGGAATTGA ACAAGATCGC AGCGCGGCTC
AATGAAAGGC CCAGAAAGAC ATTGGGCTTC ATGTCTCCGG CCGATAAACT ATGCGAGGCT
GTTGCAGCGA CTCATTGA
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| Protein sequence | MAQMGRPGLS PEGKSEVWRR WRAGESFLGI GKALGKPAGS IYGVIRLCGG YTPAARKRSL
RALTLSEREE ISRGVSAGLS IRAIARQLNR APSTISREIA RNGGTGHYRA LEADERALQA
ALRPKRCLLE QNRRLRYAVE RKLCREWSPE QVSGWLKNRY ADDEAMRVSH ETIYRSLFVQ
ARGVLKKELQ YHLRTQRKMR HSRSSSTKGA RNKIADAVLI HERPREAADR AVPGHWEGDL
VSGANNTHVA TLVERRSRFT IIVKVKGKDT VSVVAGLKRE VKRLPQHLRK SLTWDRGMEL
ANHKDFTIAT DVKVYFCDPR SPWQRGTNEN TNRLLRQYLP HGTQLDQYSQ AELNKIAARL
NERPRKTLGF MSPADKLCEA VAATH
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