Gene BamMC406_6526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6526 
Symbol 
ID6181772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp20824 
End bp21966 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content60% 
IMG OID641685295 
Producthypothetical protein 
Protein accessionYP_001812200 
Protein GI172064550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCG ATCCTGCACT CCCTCATTCA AGCATCGCAG CTGGCTCGGC CGCGACCTGG 
CAACCGCCAC GCGTTGCCGC TGCCCGACGT CGACCTGCCG TTCATCTTCT GACGCTTCCG
TCCTTCTCGA CGGAGGTGCC AGGGACGGTT CGGTTGAAGT GGCGTGAAGA CGTGCACCTG
TCGGATCTGG TTCTGAAGCA TTTCCAGTAC GGACCGTTGC GCGCAGGTGA CGTTCATGAT
CCGGCCGACG CCGGCGACGC GTTCCAGCAG GCGTTTCATG CGTGGACGCA ACGCCAGTAT
GGGCGTCTTT CCCGGCTCCG ATTCGCACCG CATCTGTTCG ATGCGCATGC GGTTCGTGAT
GTTCTCGATG GCCTCAGTAA CGGGAACAAC GTGGACGACC CGACGCCGCT GTTCTTCGGG
TTCCGCCTTG AAGACGAGTG GGTGTACTCG CTTGAAGGGG CGATCGAGAC ACTGCGGTCG
GCCCACCCGT TGCTCTTCCG GACGATGATG TCCGCGTTGT ATCTCGCATC GGCTCGGACA
ATGTTCATCC GCCTGCCAGA CTGGTTCATG TACGAATTTT CGTGCTGGTA CTGGGACGGC
GATCCGGACA TTTCGGACGA AGATGCGGAC GAAATGCTGA AGGAGCGTTT CCACGACGAT
ACGGAAACGC GCACTGCGTA TCTGCCGTCG GTCGTGCGGC CACAACTTTG TCCGGACGAC
GCTGATCCGT GTGCGTTTAG CGGCGGCAAA TGGCGTGAGC GACGCACCCT AACGGACCCG
GAGCTGCTTC GGCTTCGCGA TCGCAGCAGG GGCATGCCTC GGCGTGTCTG CACCGAGGTG
CTGAAGCTCC GCGCGCTGAT GCGCCGTAGC CGAACGCGGG ATCTGTTTCA TGTGAGCTAC
ACCGCAAATC CGGTTTACGC GCTTTGCTCG GTGATCGTCG GGGACAACCA GTTTGTCGGC
GACCTTCTCG ATTGTCATTT CGACAATGAA AGCCAATCCG GCGATGCGAC CACCTACAGC
GGATTTTCCC GTCTGGCGTC GACTCCGAAG GCTATTCGCC GCCAGTACGC CGACCTGGCA
CTGGCGTTTC GCATTCTCAC TCACCTTGAC CGCCTTCTAG CGCTGGTAAG TCATCCCACT
TAA
 
Protein sequence
MFFDPALPHS SIAAGSAATW QPPRVAAARR RPAVHLLTLP SFSTEVPGTV RLKWREDVHL 
SDLVLKHFQY GPLRAGDVHD PADAGDAFQQ AFHAWTQRQY GRLSRLRFAP HLFDAHAVRD
VLDGLSNGNN VDDPTPLFFG FRLEDEWVYS LEGAIETLRS AHPLLFRTMM SALYLASART
MFIRLPDWFM YEFSCWYWDG DPDISDEDAD EMLKERFHDD TETRTAYLPS VVRPQLCPDD
ADPCAFSGGK WRERRTLTDP ELLRLRDRSR GMPRRVCTEV LKLRALMRRS RTRDLFHVSY
TANPVYALCS VIVGDNQFVG DLLDCHFDNE SQSGDATTYS GFSRLASTPK AIRRQYADLA
LAFRILTHLD RLLALVSHPT