Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6422 |
Symbol | |
ID | 6182233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 1032469 |
End bp | 1033146 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641689545 |
Product | hypothetical protein |
Protein accession | YP_001816404 |
Protein GI | 172065692 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.99012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCT CCATCGTCGG ACGCTGCCCG GAAACGGGCC ATCTCGGGAT CGCGATCAGC TCGTCGAGCA TCGCGGTGGG CGCGCGCTGC CCGTGGGTGC GGGCGGGCGT CGGCGCGGTC GCGACGCAGA ACATCACGCT GCCCGCGCTC GGCCCGCAGA TCCTCGACCT GATCGAGCAC CAGCAGCTCG CGCCGGCCGC CGCGCTCGAC CGCGCGCTCA GCGCGAACGG CTGGAGCCAG TACCGGCAGG TCACGGTGAT CGACGGGCAG GGGCAGACGG CGTGCTTCAC CGGCAAGGAG GCGCTCGGCA CGCACCATGC GGTGCGGGGC GAGCAATGCG TGGCAGCCGG CAATCTGCTG GCCGCGCCGG CCGTGATCGA AGCAATGGCG CGCGCGTTCG AGCAGGCGCA CGGGCTGCTG GCCGATCGCC TGCTGGCCGC GATGCACGCG GCGATGGCGG CGGGCGGCGA GGCGGGGCCC GTGCATTCGG CCGCGCTGAA GGTGGCCGGC GACGTGACCT GGCCGATCGT CGACCTGCGC GTCGACTGGG CCGACGCCGA CCCGATCGGG CAGCTGGACA CACTGTGGCA GGCCTATCGC CCGCAGATGC AGGATTACCA GACGCGCGCG TTGAACCCGA CTGCCGCGCC GAGCTATGGA GTGCCCGGCG ATGAGTGA
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Protein sequence | MTFSIVGRCP ETGHLGIAIS SSSIAVGARC PWVRAGVGAV ATQNITLPAL GPQILDLIEH QQLAPAAALD RALSANGWSQ YRQVTVIDGQ GQTACFTGKE ALGTHHAVRG EQCVAAGNLL AAPAVIEAMA RAFEQAHGLL ADRLLAAMHA AMAAGGEAGP VHSAALKVAG DVTWPIVDLR VDWADADPIG QLDTLWQAYR PQMQDYQTRA LNPTAAPSYG VPGDE
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