| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6399 |
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| Symbol | |
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| ID | 6182544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1004675 |
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| End bp | 1005877 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641689523 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001816382 |
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| Protein GI | 172065670 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.392534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0454867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CGTGGGATCG TGCACGCCGG ATCCTGTGCG TGCGGCTCGA CAGCCTCGGC
GACGTGCTGA TGACGACGCC CGCGCTGCGC GCGCTGAAGG AGAGCGGCCA CGGCCGCCGG
CTCACGCTGC TGACTTCGCG CACCGGCGCC GCGCTCGCGC AGCATCTGCC GATGGTCGAC
GACGTGTGGA CGTATGACGC GCCCTGGGTC AAGCATCCGG ACGCGCGCGG CGATCCGGTC
GTCGATCTCG ACATGATCGA CCGGCTGCTG GCCGGCCACT TCGACGCGGC CGTGATCTTC
ACCGTGTACA GCCAGAGCCC GCTGCCGGCC GCGATGATGT GCTGGCTCGC GGGCATCCCG
CTGCGGCTCG CGCATTGTCG CGAGAATCCG TATGAACTAT TGACCGACCG CGTGCCGGAA
CCCGAGCCGG AATCGTTCGT GCGCCACGAG GTCGCGCGCC AGCTCGCGCT GGTGCGCTCG
ATCGGCGCGA AGACGTCCGA CTGGCGGATG GCGTTCGAGC CCGGCGACGC GGCGCGCCAC
GCGCTGCGCG CACGCCTGCG TGCCGCGCTG GAGCGCATCG GCGGGCCGCG CCGGCCGGGC
TCGGCACGCG CGCGCTGGCT CGTCGTGCAT CCCGGCGCGA GCGCGGCGTC GCGGCGCTGG
CCGGCGGAGC GTTTCGGCGC CGCGGCCGCG CGGCTCGCGC GGCTGTTCGA CGGGATCGCG
GTGACGGGGA GCGCCGACGA GCGGCCGCTC GTCGAGGCCG TGTGCGAACG CGCGGGGCCG
CGCGCGGTGC CGCTCGCCGG CGCGCTGTCG CTCGGCGAGC TCGGCGCGCT GATCGAGACG
GCCGACCTGC TGCTGTCGAA CAACAGCGGC CCCGTGCATC TCGCGGCCGC GCTCGGCACG
CCGGTCGTCG ACCTGTACGC ACTGACCAAC CCACAGCACA CGCCGTGGCG TGTGCCGCAT
CGCGCGTTGA ACGTCGATGT GCCGTGTCGC AACTGCTATC GCAGCGCATG CAACCAGCCG
GGGCATCCGT GCCTGCTCGG CGTGAGCGTC GACGACGTCG TCGCGGCGAC GCACGCGCTG
CTACGCGGCA GCGAGCGCCA TGCGCAACGC GCGGCCGGGC GCGCCGCCGT ACGCGGCGTC
GAGCCGGTCG CCGCGAACGC ATCGAACGTG ATTCCCTTCG CGCACGTCAT CACCAGGAGC
TGA
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| Protein sequence | MSAAWDRARR ILCVRLDSLG DVLMTTPALR ALKESGHGRR LTLLTSRTGA ALAQHLPMVD
DVWTYDAPWV KHPDARGDPV VDLDMIDRLL AGHFDAAVIF TVYSQSPLPA AMMCWLAGIP
LRLAHCRENP YELLTDRVPE PEPESFVRHE VARQLALVRS IGAKTSDWRM AFEPGDAARH
ALRARLRAAL ERIGGPRRPG SARARWLVVH PGASAASRRW PAERFGAAAA RLARLFDGIA
VTGSADERPL VEAVCERAGP RAVPLAGALS LGELGALIET ADLLLSNNSG PVHLAAALGT
PVVDLYALTN PQHTPWRVPH RALNVDVPCR NCYRSACNQP GHPCLLGVSV DDVVAATHAL
LRGSERHAQR AAGRAAVRGV EPVAANASNV IPFAHVITRS
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