| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6390 |
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| Symbol | |
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| ID | 6182535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 993002 |
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| End bp | 995314 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641689514 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001816373 |
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| Protein GI | 172065661 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.186908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA TTGCACGGCC GCAGGCCGGA AATTACGCAA CCGCCGTGAT GCTCGTCGCG
ACCGCGACCG TGCTGCAAAC GCTGGCGATC CGCTTCGGCG GCGTGAACCT GCCGCTGATC
CTGTATTACC CGCTGCTCGC CGGCGCCGCG TGGGCGACGT CGTTCCTGTT CGGGGTCCTG
TCGACCGTGC TCAGCGGGCT GCTGGTGTGG ACGCTGTTCC TGTCCGATGC GTCCGCGTAT
ACCGGGCCGC TGTCCGACCG CCTCGTGCGT CTCGGCATCT TCATGCTGGT CGGCGTGCTG
GTGTGCGCGA TCGCGGCGAG GCTGCGGCAC ACGCGGCGCA CGAACGATCT GGCATACCGG
CGCGAGGCCG CCGCGCGGCG GCAACTCGAC GCCGTGCTGC AGGCGTTGCC GGAGGGCGTG
ATCGCGACCG ATGCGCAAGG CTGCATAACC TACGTGAACG CGGCGGCGAT CGCGCTGGCC
GGCGGCGCGC TCGACGATGC GACGGGCCGC CCTGTGCGCG ACGTGCTGCA CGTGTTCGAT
CGCGACGACC GGCGCGTGCA GCCGACGCCG CTCGAGCGCG CGCTCGCCGG CGCACATGCG
CTGTCCGACC GGCACTGGCT GCACGGCGCC GACGGCAGTC CGTCGGTACC GATCGTCGAG
GCCGCGTCGC CGATCGTCGA CGCGCACGGC AACCTCGACG GCGCAGTGCT GTTGCTGCGC
GATGCGGGTA CGGAGCGCGC GTTGGCGGAG GTGTCGCGCC TGCAGCGCGC GGTGGTCGAT
GCGTCGCCGG ACGCGATCGT CGGGATCGAC CGCGAGGGCC GCATCGTCAG CTGGAATCCG
GCCGCGCAGC GGATCTTCGG GTATGACGAA GCCGACGCGC GCGGCCGTCC GCTCGAAACG
CTGGTCGCGA TGCGCTGGCT GCGGCGCAAC CCGCTCGCCG ATTCCTTCGA CGCGATGCGC
GAAGCGGTCG GCCCGCTCGA ATTGCTGTGC GTGCGCCGCG ACGGCCGGCG TTTTCGCGCA
ACGGTGTCCG CAGGCCCGGT GCACGGCGGC GCGCGCAGCT GCGTCGCGCT GTCGCTGACG
TTGCGCGAGA CGGGCGCGCA GCGCCGGCGC GACCTGCGCA CGCAGCGCTC GCTGCAGGGC
GCACGCGACG CGCGCGACCG GGCCGATACG TCGAATCGTC TGAAGGACGA ATTGCTCGCG
ACCGTGTCGC ACGAACTGCG CACGCCGCTG AACGTGATCT ACGGCTGGAT CGAGGTGCTG
CGCAATACGC GCGACGACGC GCTGGAACAG CAGGCGATCG ATGCGATCGA CCGCAGCGCG
CGTTCGCTGA CGCGCATGGT GGGCGACATC CTCGACGCGT CGTCGCTCGC GACCGGCAAG
CTGCGGATCG ATCCGATGCC GGTCGACGTG GTGCGGCTCT TCTCCGATAC GGTCGGTGCG
TTCCAGACGG CCGCGTCGTC GGCCGGCATC GTGCTCGAGT TCGAGTGCGC GGCGAGCGCC
TGCGTGGTGT CGGGCGACGC GGAACGCCTG CGGCAGATGC TCGCGAATCT CGTATCGAAC
GCGCTGAAAT TCACGCCGGG CGGCGGCGCG GTGACGGTCA CGCTGTCGCG CGACGACGCG
CATGCGGTGC TGGTCGTCGC GGACACCGGG CAGGGCATTC CGCCCGCGTT CATTCCCCAT
GTATTCGACA TGTTCCGCCG CGCGGACGAT TCGCCCGCGT CGCCGCGGCG CGGGCTCGGG
CTCGGCCTGT CGATCGTGCG CCACATCGCC GGGCTGCACG GCGGCCAGGT GCGGGTCGAA
AGCGAGGGCC GCAATCGCGG CGCGACCTTC ACGGTGACGC TGCCGGCCGG CTGGCAGCCG
TCCGGCGCGA TGGCGTGGGG CATCGTGCAG GCCGACGGCC GGCGCGACCG GCTCATGCTC
GATGCGCAGC GCATCCTGAT CGTCGACGAC GACGCGACCA CGCGCGCGAG CCTGACCGCC
GCGCTGACGA CGCTCGGCGC GGCCGTCTCG ATCGCGTCGT CGGGCCGCGA AGCGCTCGCG
GTGGTCGCCA ATCTTCAGCC GACCGTCGTG CTGTCCGATC TCGCGATGCC CGACGGCGAC
GGCGACGGCT TCTGGCTGCT CGACGCGTTG CGGCACGGCC GTGCGCACGG CGCGACGCCG
CGCGACCTGC GCGTGCTGGC CGTCACGGCC CACGCGGGCC CCGCCGACGA ACGGCGCGCG
CTCGAAGCGG GGTTCGACGG CTTTCTGTGC AAGCCGGTCG ACGTGCGCGA GCTGGCGCAC
AAGATCGCGG ACGTGACGCA GCGCGACGGC TGA
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| Protein sequence | MSEIARPQAG NYATAVMLVA TATVLQTLAI RFGGVNLPLI LYYPLLAGAA WATSFLFGVL
STVLSGLLVW TLFLSDASAY TGPLSDRLVR LGIFMLVGVL VCAIAARLRH TRRTNDLAYR
REAAARRQLD AVLQALPEGV IATDAQGCIT YVNAAAIALA GGALDDATGR PVRDVLHVFD
RDDRRVQPTP LERALAGAHA LSDRHWLHGA DGSPSVPIVE AASPIVDAHG NLDGAVLLLR
DAGTERALAE VSRLQRAVVD ASPDAIVGID REGRIVSWNP AAQRIFGYDE ADARGRPLET
LVAMRWLRRN PLADSFDAMR EAVGPLELLC VRRDGRRFRA TVSAGPVHGG ARSCVALSLT
LRETGAQRRR DLRTQRSLQG ARDARDRADT SNRLKDELLA TVSHELRTPL NVIYGWIEVL
RNTRDDALEQ QAIDAIDRSA RSLTRMVGDI LDASSLATGK LRIDPMPVDV VRLFSDTVGA
FQTAASSAGI VLEFECAASA CVVSGDAERL RQMLANLVSN ALKFTPGGGA VTVTLSRDDA
HAVLVVADTG QGIPPAFIPH VFDMFRRADD SPASPRRGLG LGLSIVRHIA GLHGGQVRVE
SEGRNRGATF TVTLPAGWQP SGAMAWGIVQ ADGRRDRLML DAQRILIVDD DATTRASLTA
ALTTLGAAVS IASSGREALA VVANLQPTVV LSDLAMPDGD GDGFWLLDAL RHGRAHGATP
RDLRVLAVTA HAGPADERRA LEAGFDGFLC KPVDVRELAH KIADVTQRDG
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