| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6386 |
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| Symbol | |
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| ID | 6182151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 988868 |
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| End bp | 989896 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689510 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001816369 |
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| Protein GI | 172065657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.875817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.430331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGCA TGCTCAAACC GGTCGGCGAG CAGACGATCG TGATCACGGG CGCCACGAGC
GGCATCGGCC TCGTCACCGC GCGCAAGGCG GCACGGCGCG GGGCGAAGCT GGTGCTGTTC
GCGCGCAACG AGGACGCGCT GAACACGCTG TGCGAGGAAA TTCGCCAGCA TGGCGGCCTC
GCGGTGCCGG TCGCCGGCGA CGTCGGCAAT GTCGAGGATC TGCAGCGCGC GGCCGCGAAG
GCGGCCGATA CCTATGGCGG CTTCGACACG TGGGTCAACA ACGCGGGCGT GTCGATCTTC
GGCACGGCGG CCGCGGTGCC GCTCGAGGAT CAACGCCGGC TGTTCGACAC CAACTACTGG
GGCGTCGTGC ATGGCTCGCT CGTCGCATCG GACCATTTCC GCCGCAAGAA CGATTTCCAT
GGCGGCGCGA TCATCAACAT GGGCAGCGAG GCGTCCGACG CGCCGCTGCC GCTGCAAAGC
GCGTACACCG CATCGAAGCA CGCGGTGAAG GGCTTCACCG ATTCGCTGCG GCTCGAGCTG
GAGTCGGATC ACCTGCCGGT ATCCGTCACG CTGATCAAGC CGGCCGCGAT CGACACGATG
TTCGTGATGC ACGCGAAGAA CTACATGAAC GTCGAGGCGA AGCTGCCGCC GCCGATCTAC
GACCCGGAGC TCGTCGCCGA CGCGATCCTG TACGCGGCCG CGCATCCGCG CCGCACGCTG
TTCGTCGGCG GCGCCGCGAA GTTTACGTCG GCCAGCGCGT ACCACGCGCC GCGGCTGTTC
GATCGCGTCG CGGCCACGCT GTTCTCGCGC GGCCAGCGCA CGGTGCGCCC CGCGCGCCCG
CGCGACGACA ACGCACTGTA CGAGTCGCGC CACGTGTTGC ACGAGCGCGA AGGGATGGAG
GGCCATGTGC TGCGCGGCTG TGCGTACAAC GCGGTGGTGC AGCGGCCGAA GGTCGCCGGC
GCGATCGCGC TGGGCGCGGC GGCGCTGGCG GTTACCGCAT TGACGCGCGC GCGCCGCACG
CCGACCTGA
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| Protein sequence | MKCMLKPVGE QTIVITGATS GIGLVTARKA ARRGAKLVLF ARNEDALNTL CEEIRQHGGL
AVPVAGDVGN VEDLQRAAAK AADTYGGFDT WVNNAGVSIF GTAAAVPLED QRRLFDTNYW
GVVHGSLVAS DHFRRKNDFH GGAIINMGSE ASDAPLPLQS AYTASKHAVK GFTDSLRLEL
ESDHLPVSVT LIKPAAIDTM FVMHAKNYMN VEAKLPPPIY DPELVADAIL YAAAHPRRTL
FVGGAAKFTS ASAYHAPRLF DRVAATLFSR GQRTVRPARP RDDNALYESR HVLHEREGME
GHVLRGCAYN AVVQRPKVAG AIALGAAALA VTALTRARRT PT
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