| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6328 |
|---|
| Symbol | |
|---|
| ID | 6182632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 934716 |
|---|
| End bp | 935786 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641689454 |
|---|
| Product | arsenical-resistance protein |
|---|
| Protein accession | YP_001816313 |
|---|
| Protein GI | 172065601 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
|---|
| TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.128519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0160449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGT CCAACGTCGT CCCGCCTCGC AACCCCGCCG TCAGGCCCGC GATCAACTTC
TTCGAACGCT ACCTGACGCT CTGGGTCGCG CTGTGCATCG TCGCCGGCAT TGCGCTCGGC
CAACTGCTGC CCGGCCTGTT CCAGCGGATC GGCCGCATCG AGTATGCGCA GGTCAACCTG
CCGGTCGGGC TGCTGATCTG GGTGATGATC GTGCCGATGC TCGTGAAGGT GGACTTCGGC
GCGCTGCATG AGGTGCGCCG GCATGTGAAG GGAATCGGCG TCACGCTCGC CGTGAACTGG
CTCGTCAAGC CGTTCTCGAT GGCGTTCCTC GGCTGGCTGT TCGTGCGGCA GTTGTTCGCG
CCGATGCTGC CGGCGGACCA GCTCGACAGC TACATCGCCG GCCTGATCCT GCTGGCCGCC
GCGCCGTGCA CCGCGATGGT GTTCGTGTGG AGCCGGCTCA CGGGCGGCGA TCCGCTGTTC
ACGCTGTCGC AGGTCGCGCT CAACGACAGC ATCATGGTGA TCGCGTTCGC GCCGCTGGTC
GGGCTGCTGC TCGGGATGTC CGCGATTACC GTGCCTTGGG CGACGCTGCT CACGTCGGTC
GTGCTCTACA TCGTGATTCC GGTGATCCTC GCGCAGCTTT GGCGCAAGCG GCTGCTGAGG
AACGGGCAGG CCGCGTTCGA CGCCGCGATG GCGCGGATCG GCCCGTGGTC GATTGCCGCG
CTGCTGGCCA CCCTCGTGCT GCTGTTCGCG TTCCAGGGCG AAGCGATCCT CAAGCAGCCG
CTGGTGATCG CGTTGCTCGC GGTGCCGATC CTGATCCAGG TGTTCTTCAA TGCGGCGCTC
GCGTACTGGC TCAATCGCGC GGTAGGCGAG AAGCACAACG TCGCGTGTCC GTCCGCGCTG
ATCGGCGCAT CCAATTTCTT CGAGCTCGCC GTCGCGGCCG CGATCAGCCT GTTCGGTTTT
CACTCCGGTG CGGCGCTCGC GACCGTCGTC GGCGTGTTGA TCGAGGTGCC GGTCATGCTG
CTGGTGGTGC GCATCGTGAA CCGGTCGAAG GGCTGGTACG AGCGCGTTTG A
|
|---|
| Protein sequence | MNTSNVVPPR NPAVRPAINF FERYLTLWVA LCIVAGIALG QLLPGLFQRI GRIEYAQVNL
PVGLLIWVMI VPMLVKVDFG ALHEVRRHVK GIGVTLAVNW LVKPFSMAFL GWLFVRQLFA
PMLPADQLDS YIAGLILLAA APCTAMVFVW SRLTGGDPLF TLSQVALNDS IMVIAFAPLV
GLLLGMSAIT VPWATLLTSV VLYIVIPVIL AQLWRKRLLR NGQAAFDAAM ARIGPWSIAA
LLATLVLLFA FQGEAILKQP LVIALLAVPI LIQVFFNAAL AYWLNRAVGE KHNVACPSAL
IGASNFFELA VAAAISLFGF HSGAALATVV GVLIEVPVML LVVRIVNRSK GWYERV
|
|---|
| |