Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6326 |
Symbol | |
ID | 6182630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 931089 |
End bp | 933863 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641689452 |
Product | malto-oligosyltrehalose synthase |
Protein accession | YP_001816311 |
Protein GI | 172065599 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0514594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0507365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC GCGCGACCCT GCGATTGCAG CTGCACGCGG GCTTCACGTT CGACGACGCG GCCGCACACG CCGACTATTT CGCGCGCCTC GGCGTGAGCC ACCTGTACCT GTCGCCGATC ACGACGGCCG AGCCCGGTTC GCTGCACGGT TACGATACGG TCGACCATCG CGCGCTCAGT ACGGAACTCG GCGGCGAGGC CGGCTTCCGG CGCCTCGTCG ACGCGCTGCG TGCGCGCGGC CTCGGCGTGA TCGTCGACAT CGTGCCGAAT CACATGGGCG TCGGCGGCGC GTCGAACGGC TGGTGGAACG ACGTGCTCGA ATCGGGACAG GCGAGCCCGT ACGCACGCTA CTTCGACATC GACTGGCACC CGCCCGATAC GGCGCTCGAC GGCAAGGTGC TGCTGCCCTG CCTCGGCGCG CCCTACGGCG ACGCGCTCGC GTCCGGCGAC ATCACGCTCG GCGCCGATCC ATCGGCCGGG CGCTTCTTCA TCGCGTGCCC GGGCAAGCGG CTGCCCGTCG CCATCGCGAC CTACGCGGAA ATCCTGCGCA TCGCGAACCG CGCGGACCTG AACGCGCTCG CCGAGCGTTT CGCCGCCGCA TCGGCGCGTG GCGGCCCGCG CGTCGCGGCC GCGCACGCGG CGCTGCGCGA CTACGCCGCC GCCCAGGGCC CGCATGCGTT CGACGCGATA TTGCGCGGCG CCGACCCGCG CCGCGCACGC TCGCGCGCGT GCCTGCACCG CTTGCTCGAA CGCCAGCACT ACCGGCTCGC GTGGTGGCGC ACCGCCGCCG ACGAGCTGAA CTGGCGGCGC TTCTTCGACA TCGCGACGCT CGCGGCCGTG CGCGTCGAGG ACGACGCGGT GTTCGACGCA GTGCACGCGC TGCCATTGGG CCTCCACGCG GCCGGCTACA TCGACGGCCT GCGCGTCGAT CACGTCGACG GCCTCGCCGA TCCGCGCGCG TACTGCCGCC GCCTGCATGC GCGGCTCGCC GCGCAGCGCG ACGAGCGGCC GTATGTCGTC GTCGAGAAGA TCCTCGCGCC GGGCGAGACG CTGCGCGAAG ACTGGCGCGT CGACGGCACG ACCGGCTACG ACTTCATGAA CGACGTCGCC GCGCTGCTGC ACGACCCGGC CGGCGCCGCG CCGCTCGCCG CGCACTGGGC GGCCGTGTCG GGATCCGCGC GCTCGTTCGC GCAGGAAGCG GTGGCCGGCA AGCGGCGGGT ACTGAAGCGC CAGCTCGCCG GCGAACACGC GCGCGTCGCG CGCGCCTTGC ATCGCATCGC GCGTGCGGCG CCCGCGACGC GCGACGTCAG CCAGATTGCG ATCCATCGCG TGCTGGGCGA ACTGGCCGTG CATCTGCCCG TGTACCGGAT GTACCCGACG CCCGGCGACG AGCCCGCCGG CGCCGATGGT CGCGTGCTGA CGCTCGCGTA CGACGCGGCG TGCGCCTCGA TCGATCCGTC CGACCGCTAC GCGCTCGATC GCGTCGCCGG CTGGCTCGGG CTGCCGGGGA TGCGCGTGCC GCGCGCGGAT GCCGCGCTGC TGCACGCGGC GCGTGTCGCG TTCGCGCAGC TCACCGCGCC GCTCGCCGCA AAGGGCGTCG AGGACACGGC CAACTACCGG TACGGGCGAC TGCTGTCGCG CAATGAGGTC GGCGCCGACG CGGGCGACTT CAGCCTGTCG CGCGGCGCGT TCCATGCACG CAACCGGCGT CGCGCGCGCA GCGTTCCTCA TACGCTCGTC GCGACCGCGA CGCACGATCA CAAGCGCGGC GAGGATGCGC GTATGCGGCT CGCGGTGCTC AGCGAAATGC CCGACGCGTG GCGCGCGGTG TCGCTCGACT GGTCCGCGCT GAACCAGCCG CACCGCGGCG GCGCGCATCG CGATCTTGCG TGGGCGCCGG GGCCGGCCGC GGAAGCGATG CTGTACCAGA CGCTCGTCGG CTGCTGGCCG CCGGGCCTCG CGCCCGACGA TGCGGCCGGA CTTGCTGCGC TTGCCGAGCG CGTGGTGCGC TGGCAGACGA AGGCCTTGCG CGAAGGAAAA CAGCATACGG ACTGGCTCGC GCCCGACGCC GACTACGAGC GCGCTTGCGA GCAGTTCGTG CGCGCGATCC TGACGCCGCG CGGCGCGGGC GATTTCGTGC ACCGGCTGCA TGCGTTCGTC GCGCGGATCG CACCGGCCGG GGTGGTCAAT AGTCTCGCGC AGGCGACGCT GCGAATGGCG TCGCCGGGCG TGCCCGATCT GTACCAGGGG ACCGAGTCAT GGGATCACTC GCTCGTCGAT CCGGACAACC GGCGCGACGT GCCGTTTGCC GCGCTCGCGG CCGAACGGGT CGATGAACCG GTCGCCGCGT ATCTGCGGCA CTGGCCCGAT GCGCGCGTGA AGCGCGCGCT CGTCGAGCGG ATGCTCGCGC TGCGCGCACG ATGGCCCGAA ACGTTCGCGG ATGGCGCCTA TATGCCGCTG CGCGTGCGCG GCCGGCTCGG CCGGCATGCG GTGGCGTTCG CCCGGCGCGA CGAAAGCGCA ACGATCGTGG TGATCGTCAC GCGGCTCGCG TGCGGGTGGC TGGGCGAAGC GCCGGAATTG CCGCGCGTCG AGCCTCGTGA ATGGGGAGAT ACGGTCGTGG TGCTGCCGCG CGGTGCTGGC GAGCGGTGGA TCGACTGGCT GAATGATGGA AGCGAAGTCG AGGCGCCGGA CGGCACGATG CGACTCGCTC GATGTCTGGC GACGTTGCCG GTTGCGGTGC TGGTGGCTGG CGATACGAAG CGTCGCGAGC TGTAG
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Protein sequence | MTPRATLRLQ LHAGFTFDDA AAHADYFARL GVSHLYLSPI TTAEPGSLHG YDTVDHRALS TELGGEAGFR RLVDALRARG LGVIVDIVPN HMGVGGASNG WWNDVLESGQ ASPYARYFDI DWHPPDTALD GKVLLPCLGA PYGDALASGD ITLGADPSAG RFFIACPGKR LPVAIATYAE ILRIANRADL NALAERFAAA SARGGPRVAA AHAALRDYAA AQGPHAFDAI LRGADPRRAR SRACLHRLLE RQHYRLAWWR TAADELNWRR FFDIATLAAV RVEDDAVFDA VHALPLGLHA AGYIDGLRVD HVDGLADPRA YCRRLHARLA AQRDERPYVV VEKILAPGET LREDWRVDGT TGYDFMNDVA ALLHDPAGAA PLAAHWAAVS GSARSFAQEA VAGKRRVLKR QLAGEHARVA RALHRIARAA PATRDVSQIA IHRVLGELAV HLPVYRMYPT PGDEPAGADG RVLTLAYDAA CASIDPSDRY ALDRVAGWLG LPGMRVPRAD AALLHAARVA FAQLTAPLAA KGVEDTANYR YGRLLSRNEV GADAGDFSLS RGAFHARNRR RARSVPHTLV ATATHDHKRG EDARMRLAVL SEMPDAWRAV SLDWSALNQP HRGGAHRDLA WAPGPAAEAM LYQTLVGCWP PGLAPDDAAG LAALAERVVR WQTKALREGK QHTDWLAPDA DYERACEQFV RAILTPRGAG DFVHRLHAFV ARIAPAGVVN SLAQATLRMA SPGVPDLYQG TESWDHSLVD PDNRRDVPFA ALAAERVDEP VAAYLRHWPD ARVKRALVER MLALRARWPE TFADGAYMPL RVRGRLGRHA VAFARRDESA TIVVIVTRLA CGWLGEAPEL PRVEPREWGD TVVVLPRGAG ERWIDWLNDG SEVEAPDGTM RLARCLATLP VAVLVAGDTK RREL
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