| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6149 |
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| Symbol | |
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| ID | 6182306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 734015 |
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| End bp | 734767 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641689277 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001816136 |
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| Protein GI | 172065424 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.767599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAA AGGGTAAAAC CGCGTTGATT ACCGGCGCGA CCAGCGGCAT CGGTCTGGCT
ACCGCCGAGT TGTTCGTGCG CGAGGGCGCG CAGGTAGCGA TCACCGGTCG CGACGAGGCA
CGGCTGAAGC GCGCGCGCGC CAAGCTGGGC GGTGCGATCA CGACCATCCA GGCCGACGTG
CGCAACAGCG AGGACATGAA GCGGATGGCT CGACAGGTCG CGGACGCCTT TGGCGACGAC
GGGCTCGATA TCTTCTTCGG CAATGCCGGT GTGGCGTTCT CCACGCCGCT GCTGACCACG
GATGAGGCCC GCTTTGACGA ACTGCTGGCA GTCAACGTCA AGGGGCTCTT CTTCTCCATG
CAAGCCGTGA CACCCGTGCT GCGCGATGGG GCGTCGGTGA TTCTCAATTC TGCATGGCTC
AATAACGTTG GCATGGGCGG TTTCTCGGCG CTAGCTGCCA CGAAGGCGGC GGTTCGCTCG
TTCGCGCGCT CGTGGTCCTG CGAATTGCTG GATCGCAAGA TACGGGTCAA TGCCGTTAGC
CCCGGCGCGG TCGATACGCC AATCTTTGAG CTGGAAGGTG CAACGCCCGC GCAGCTGGCT
GAGACGAAAC GTCAGATGTC CTTACGTATT CCGGCCGGCC GCATGGGAGA GCCGCTGGAA
ATTGCCCAGG CCGTGCTATT CCTTGCCAGC GATGATTCGC GCTACATGAT GGGCGCCGAA
ATCGTCGTCG ATGGCGGATT CGCGCAGCTC TGA
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| Protein sequence | MRLKGKTALI TGATSGIGLA TAELFVREGA QVAITGRDEA RLKRARAKLG GAITTIQADV
RNSEDMKRMA RQVADAFGDD GLDIFFGNAG VAFSTPLLTT DEARFDELLA VNVKGLFFSM
QAVTPVLRDG ASVILNSAWL NNVGMGGFSA LAATKAAVRS FARSWSCELL DRKIRVNAVS
PGAVDTPIFE LEGATPAQLA ETKRQMSLRI PAGRMGEPLE IAQAVLFLAS DDSRYMMGAE
IVVDGGFAQL
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