Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6141 |
Symbol | |
ID | 6182298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 725608 |
End bp | 726225 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641689269 |
Product | aspartate racemase |
Protein accession | YP_001816128 |
Protein GI | 172065416 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.422237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGCG AAGGTCTGCA CTGCGCGAAA CTGGTCCTTG CACAGACCGA CTTCGAGGTG ATCGAACGTC GACAACGGGA AGGGCGCTGG GATATCGTGG GCGACTTGCT TGCTGCAGAG GGTAACAAGC TGAAGGCTGC GGGCGCCGAT TTCTTCCTTC TGGCCTGTAA TACCGTACAT ACGGCAGCTG AGCGGATCGA GGCGAATGTC GATCTGCCGT TCATCCACAT AGTCGATCCA ACGGCCCGCA GCGTACTGGA GAGAGGCTAC AAAACCGTCG GTTTGCTTGG CAGCCGCTAC ACGATGACAG GAACCTATTT CGTTGGCCGG CTCAAGGATC GCTATGGCCT CGACGTTGTC ATTGCAGAGG GCGAGCACCA GGAGAACGTA CACAACGCCT TGTACGAAGA ACTGGCCAAG GGCATCTTCC TGCCCGAAAC ACGCGAGAAG TTCAGGAGAG CGATCGCCGA TCTGGTATCC CGTGGCGCGG AAGTGATTGT TCTGGGATGT ACGGAGTTCG GCATGCTTGT CAAACCCGAG GATAGCCCCG TCCCGATTAT CGATACGTCC ATTGCTCATG CCGAGGCTGC AGTCAGATTG GCATTGGCGT CCGAATAG
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Protein sequence | MGGEGLHCAK LVLAQTDFEV IERRQREGRW DIVGDLLAAE GNKLKAAGAD FFLLACNTVH TAAERIEANV DLPFIHIVDP TARSVLERGY KTVGLLGSRY TMTGTYFVGR LKDRYGLDVV IAEGEHQENV HNALYEELAK GIFLPETREK FRRAIADLVS RGAEVIVLGC TEFGMLVKPE DSPVPIIDTS IAHAEAAVRL ALASE
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