Gene BamMC406_6093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6093 
Symbol 
ID6182204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp678709 
End bp679272 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content63% 
IMG OID641689223 
Productheat shock protein Hsp20 
Protein accessionYP_001816082 
Protein GI172065370 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG ATCCGAAAAA GTGGAACCCC TTCAAGTTTC TTCGCGGCGC TGCCCGCAAG 
TCCGATGCGG AAGGCCCGGA AAACGCGTCG GCCAGCGAGC AATGGCGCGC GTCGTGGCCC
GACATTTCGC GCCTGTTCTC GCGCGAATCA TGGGGTGCGA TGGAGGACTT CTTTCATGAC
CCGTTTGCCG GCCGTGGCGC GCTCGAGCGC TGGTTCGGCG ACTTCAGTTC ATCGCGTTTC
CAGCCGCGCA TCGACGTCGT GGATGAAGGG CCGGTGCTGC GCGTGACCGC CGAACTGCCC
GGCATGGAGC GCGACGATCT GAAGGTGAGC GTCGAGGATG GGGCAATCGT GCTGCGCGGC
GAGAAAAAGC AGGACGTGCA CAGCGAGGAA AACGGCTGCT ACCGGCTGGA GCGCGCGCAC
GGAAGCTTCA CGCGCACGAT CCCGATGCCG GAAAACGCCG ACCCCGAGCA CACGTTGGCA
AAGTTCGACA ACGGCGTCCT TACGTTGACC GTGCCGAAAT CGGAGCCGGC CAAATTCACG
AGCCGCACGA TCGATATCGG CTGA
 
Protein sequence
MNTDPKKWNP FKFLRGAARK SDAEGPENAS ASEQWRASWP DISRLFSRES WGAMEDFFHD 
PFAGRGALER WFGDFSSSRF QPRIDVVDEG PVLRVTAELP GMERDDLKVS VEDGAIVLRG
EKKQDVHSEE NGCYRLERAH GSFTRTIPMP ENADPEHTLA KFDNGVLTLT VPKSEPAKFT
SRTIDIG