Gene BamMC406_6084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6084 
Symbol 
ID6182035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp673390 
End bp673689 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content63% 
IMG OID641689214 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001816073 
Protein GI172065361 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.78955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCT ACCTCGAACT CAAAGCACAG GCAGAAGCGC TGGCACAGAA AGCGGAAGCA 
GCGCGACTCG CCGAACTGGA AAGCCTTATC GCGACGATGC GTGAGCAGAT TGCCGAATAT
GGCATCACGC CCGACCAGCT TTTCGGGCGA CGTCGTGCCG CTTCGGCGGG CGCCACCCGC
GCACCGGTCG CACCGAAGTA TCGCGATCCG AAAACGGGCG CGACGTGGAG CGGGCGCGGC
AAGCCGCCGC ATTGGATTGC AGGCGCAAAG AACCGTGACC GGTTTTTGAT CGAGCAGTGA
 
Protein sequence
MATYLELKAQ AEALAQKAEA ARLAELESLI ATMREQIAEY GITPDQLFGR RRAASAGATR 
APVAPKYRDP KTGATWSGRG KPPHWIAGAK NRDRFLIEQ