Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6071 |
Symbol | |
ID | 6182022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 641514 |
End bp | 642329 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641689201 |
Product | two component AraC family transcriptional regulator |
Protein accession | YP_001816060 |
Protein GI | 172065348 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCAT CGACCGCCGC ATTGAATAAT GCCCATATCC TGATCGTCGA CGATCAGCCC GACCAGCTCC GTTTGCTGAT CGATATCCTG CGCAGCACCG GATGCCGGAT CAGCATTGCA TTCGACGGCG TGCAGGCGTG CGAGCGCGCG CAGGCACTCA TGCCCGACCT GATCCTGATG GATGTCCGGA TGCCGCGCAT GGACGGTTTC ACCGCGTGCC GGCGGCTGGC GGCCGATCCG CTGACGAGCG CGATCCCTGT CATTTTCCTG ACGGTGGCCG GCGACTTGCA CGAGCGCGTC GAAGGGCTCG AAATCGGCGG CGTCGATTAT GTGGTGAAGC CGTTCGAACC GGCCGAAGTC GTCGCGCGAA TACGCGTGCA GCTCGCGCGG ACGAAACGGC CATTGCCGAT GGATGCGCCG GACGTGCACG ATCCGTTCGC GACGGGCAAG GACGACGACA TCATCGTGCG CGCGGCCATT CGGCATCTGT CGCGCACGCT GAACGATCCG CCGACGGTCG AGCAGCTCGC GCGCGCGGTC GGCACGCACG AGAAGCGGTT GTCGCGCGCG TTTCGCGACA ATCTGGGCCA GACGGTGTTC GAATATCTGC GGCACGAGCG CCTGCGCATC GCGCAGGACC TGCTCGATAC GACGTCGCTC AGCATTGCGA GCATCGCGAA GGAGATCGGC TTTTCGACGC CGGCGAATTT CGCCACCGCG TTTCGCGAAC GGTTCGGCAT CACGCCGACC GAATGGCGGC GTCAGCGCGA TGCGGCCGGG CGTGATGCCG CGCGGGAACC GCAGCGCGAC GCGTAG
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Protein sequence | MSPSTAALNN AHILIVDDQP DQLRLLIDIL RSTGCRISIA FDGVQACERA QALMPDLILM DVRMPRMDGF TACRRLAADP LTSAIPVIFL TVAGDLHERV EGLEIGGVDY VVKPFEPAEV VARIRVQLAR TKRPLPMDAP DVHDPFATGK DDDIIVRAAI RHLSRTLNDP PTVEQLARAV GTHEKRLSRA FRDNLGQTVF EYLRHERLRI AQDLLDTTSL SIASIAKEIG FSTPANFATA FRERFGITPT EWRRQRDAAG RDAAREPQRD A
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