Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6069 |
Symbol | |
ID | 6182020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 636373 |
End bp | 638592 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641689199 |
Product | LamG domain-containing protein |
Protein accession | YP_001816058 |
Protein GI | 172065346 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACA CCCCTCTCCT GCTTGAATCG AACGCGCGCG TTTCCCGGCG CACCTTCCTT TACAGCGTCG GAGCGCTCGC GCTGTCGGCA TGCAACGGCT CCGGCGCAAG CGAGAACGTG CGCGGCGTCA CGACCGCGGC AGCGGCGGGC GGCAACCGTG CGCTCGCACG CGTGGCGACG GGCACGGCCG CCGTCACGAC CCGCACGGCG TTCGTCCATC CTGGGTTGCT GCACACGCAA GCCGATTTCG ACCGGATCGC GCAGAAGGTC GCGACCGCCG CGTCGCCGTG GCGCGAAGGC TGGAACACAC TGATTGCAAA CAGCCATGCG CAGCTGACGT GGTCGCCGCG CCCGCAGGCC GTCGTCACGC GCGGCGGCAC CGGCGCGCAA AACTATCCGG TGCTGTACAA GGACATCGCG GCCGCCTATG CGTGCGCGCT GCGCTGGAAG GTGTCGGGCA ACAAAGCGTA TGCGGACAAG GCCGTGCAGA TCATGAACGA ATGGTCGTCG ACGCTGCAGA ACCTCGCGGG CGACTCGAAC GTCGACCTGG CCGCCGGCCT CTACGGGTAC GAATTCGCGA ACGCCGGCGA AATCATGCGC ACGTATTCCG GCTGGGCCGC GGCCGACTTC GCCGCGTTCC GCGCGATGAT GGCCGACAAG TTCTACCCGA TCAACGCCGA CTTCCTGAAT CGCCACAACA ACACCGACAT CACGCACTAC TGGGCGAACT GGGATCTGTG CAACATCGCG TCGATCATGG CGATCGGCGT GCTGTGCGAC GACCACGCGA AGTTCGACGA AGCCGTCAAC TATTTCATCG ACGGCGCGGG CAACGGCGCG ATCGCGCAGG CCGTCTATTA CCTGCATCCC GGCCACCTGG GCCAATGGCA GGAATCGGGC CGCGACCAGG GGCACAACAC GCTCGGCATC GCGCTCGCCG GCGCGATCTG CGAAATGGCG TGGAACCAGG GCATCGACCT GTACGGCCAC GACAACAACC GCTTCCTCGC GGGCGCCGAA TACGTTGCAA AAGCGAATCT CGTGCAGCCG GACGGCACGT TTCCGACGGT GCCGTATGCG CGCTACGCCA ACGTCGACGT CACGCAAGCG CAATTCTCGA CCGGCAGCCA AGGCGCGATT CGTCCGTGCT GGGCGCTCGT CTACAACCAT TACGTGAACC GCAGGGGGCT CGCCGCACCG TGGTCCGGGA AGTTCGCGCG CGCGATCCAG CCCGAAGGCG GCGGCGGCAA CTACGGCGAA ACGAGCGGCG GCTACGACCA GCTCGGCTAC GGCACGCTGA CCTGCACGCG CGATCCCGTT GCGCCCGCAA CCGCACCGAG CGGGCTGACC GCGTGGCCGG CCGCCGGGCA CGTCGTGCTG TCGTGGTGGG GCATCGCGAA CGCGGCCAGC TACGACGTGA AGCGTGCCGC CACCGCGGGC GGTCCGTATA CGACCATCGC GACCGGCATC GTCGATCCGT TGACGTATAC CGACCACCCG GCCGCGGGCG TCTGGTACTA CGCGATCAGC GCGCGCACCG TATCGGGCGA ATCCGCGAAT TCCGCGGAAA TGGCCGCATC GACGGCCCTG CAACTGCATA CGCTTCTGAC GTTCGACGAG ACAGGCGGCA CGAGTGCGGC GGACGCGAGC GGCAACGCTC ATGCGGGCAC GCTCGTCGGC GGCGCATCGC GCGGGGCCGG CAAAACGGGC AATGCGGTGT CGCTCGACGG CTCGACCGGC TACGTCGCGT TGCCGAACGA CATCGTCGCG GACGTGTCGG ATTTCACGAT CGCGGCGTGG GTCAACTGGC GCGGCGGCCA GACGTGGGCG CGCATCTTCG ATTTCGGTTC GGGCACCGGC CGCTATCTGT TCGTCACGCC GAAGAGCCAC GGCGGCACGA TGCGCTTCGC GATCACCACC AATGGCGGGC ATGGCGAGCG CACGATCGAC GGCAACGCGG CCCTGCCGGC AGGGCAATGG GCACACGTCG CCGTCACGCT GGCGGCCGAC ACCGCGACGC TCTATCTGAA CGGCAATGCG ATCGGCTCGG CGAACGACGT GATCTTCGCG CCGTGGCGCA TCGGGAAAAC CGCGCAGAAC TGGATCGGAC GTTCGCAATA CCCGGGCGAT CCGTTCTTCA ACGGGTTGAT CGACGAATTC CGCATCTATC GCGGTGCAAT GTCGGCCGAA CAGGTGAAGG CGCTCGCGCA GGGAGCGTGA
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Protein sequence | MHDTPLLLES NARVSRRTFL YSVGALALSA CNGSGASENV RGVTTAAAAG GNRALARVAT GTAAVTTRTA FVHPGLLHTQ ADFDRIAQKV ATAASPWREG WNTLIANSHA QLTWSPRPQA VVTRGGTGAQ NYPVLYKDIA AAYACALRWK VSGNKAYADK AVQIMNEWSS TLQNLAGDSN VDLAAGLYGY EFANAGEIMR TYSGWAAADF AAFRAMMADK FYPINADFLN RHNNTDITHY WANWDLCNIA SIMAIGVLCD DHAKFDEAVN YFIDGAGNGA IAQAVYYLHP GHLGQWQESG RDQGHNTLGI ALAGAICEMA WNQGIDLYGH DNNRFLAGAE YVAKANLVQP DGTFPTVPYA RYANVDVTQA QFSTGSQGAI RPCWALVYNH YVNRRGLAAP WSGKFARAIQ PEGGGGNYGE TSGGYDQLGY GTLTCTRDPV APATAPSGLT AWPAAGHVVL SWWGIANAAS YDVKRAATAG GPYTTIATGI VDPLTYTDHP AAGVWYYAIS ARTVSGESAN SAEMAASTAL QLHTLLTFDE TGGTSAADAS GNAHAGTLVG GASRGAGKTG NAVSLDGSTG YVALPNDIVA DVSDFTIAAW VNWRGGQTWA RIFDFGSGTG RYLFVTPKSH GGTMRFAITT NGGHGERTID GNAALPAGQW AHVAVTLAAD TATLYLNGNA IGSANDVIFA PWRIGKTAQN WIGRSQYPGD PFFNGLIDEF RIYRGAMSAE QVKALAQGA
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